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MAGEA1 MAGE family member A1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 473852, updated on 29-Mar-2024

Summary

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Official Symbol
MAGEA1provided by VGNC
Official Full Name
MAGE family member A1provided by VGNC
Primary source
VGNC:VGNC:12475
Locus tag
CK820_G0055839
See related
Ensembl:ENSPTRG00000022386
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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Location:
chromosome: X
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) X NC_072421.2 (150641418..150646024)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) X NC_072421.1 (150637502..150642096)

Chromosome X - NC_072421.2Genomic Context describing neighboring genes Neighboring gene paraneoplastic antigen-like protein 6B Neighboring gene PWWP domain-containing DNA repair factor 4-like Neighboring gene PWWP domain-containing DNA repair factor 4-like Neighboring gene PNMA family member 6F

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
melanoma-associated antigen 1
Names
melanoma antigen family A, 1 (directs expression of antigen MZ2-E)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072421.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    150641418..150646024
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016942856.4 → XP_016798345.1  melanoma-associated antigen 1

    UniProtKB/TrEMBL
    A0A2J8IL00, A0A6D2VTP6, H2QZ93
    Related
    ENSPTRP00000038579.3
    Conserved Domains (2) summary
    pfam01454
    Location:109 → 273
    MAGE; MAGE family
    pfam12440
    Location:5 → 87
    MAGE_N; Melanoma associated antigen family N terminal
Nucleotide Protein
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Gene LinkOut

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