U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MPDZ multiple PDZ domain crumbs cell polarity complex component [ Pan troglodytes (chimpanzee) ]

Gene ID: 473169, updated on 29-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
MPDZprovided by VGNC
Official Full Name
multiple PDZ domain crumbs cell polarity complex componentprovided by VGNC
Primary source
VGNC:VGNC:4788
Locus tag
CK820_G0023604
See related
Ensembl:ENSPTRG00000020776
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 9
Exon count:
51
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 11 NC_072409.2 (102606877..102783658)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 9 NC_072407.1 (16071805..16256086, complement)

Chromosome 11 - NC_072409.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC740907 Neighboring gene uncharacterized LOC740860 Neighboring gene uncharacterized LOC134807612 Neighboring gene lupus La protein-like Neighboring gene peroxiredoxin-1-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule organizing center organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical part of cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
multiple PDZ domain protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072409.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    102606877..102783658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009456297.5 → XP_009454572.2  multiple PDZ domain protein isoform X1

  2. XM_003311997.6 → XP_003312045.2  multiple PDZ domain protein isoform X4

  3. XM_003311996.7 → XP_003312044.2  multiple PDZ domain protein isoform X5

  4. XM_528539.9 → XP_528539.4  multiple PDZ domain protein isoform X8

  5. XM_016960600.4 → XP_016816089.2  multiple PDZ domain protein isoform X9

  6. XM_054657921.2 → XP_054513896.1  multiple PDZ domain protein isoform X11

  7. XM_054657915.2 → XP_054513890.1  multiple PDZ domain protein isoform X5

  8. XM_054657920.2 → XP_054513895.1  multiple PDZ domain protein isoform X9

  9. XM_024345558.3 → XP_024201326.2  multiple PDZ domain protein isoform X1

  10. XM_054657914.2 → XP_054513889.1  multiple PDZ domain protein isoform X5

  11. XM_054657918.2 → XP_054513893.1  multiple PDZ domain protein isoform X8

  12. XM_024345559.3 → XP_024201327.2  multiple PDZ domain protein isoform X9

  13. XM_054657922.2 → XP_054513897.1  multiple PDZ domain protein isoform X11

  14. XM_063787979.1 → XP_063644049.1  multiple PDZ domain protein isoform X13

  15. XM_054657913.2 → XP_054513888.1  multiple PDZ domain protein isoform X3

  16. XM_054657917.2 → XP_054513892.1  multiple PDZ domain protein isoform X7

  17. XM_054657916.2 → XP_054513891.1  multiple PDZ domain protein isoform X6

  18. XM_063787978.1 → XP_063644048.1  multiple PDZ domain protein isoform X10

  19. XM_054657912.2 → XP_054513887.1  multiple PDZ domain protein isoform X2

  20. XM_054657924.2 → XP_054513899.1  multiple PDZ domain protein isoform X12

  21. XM_054657909.2 → XP_054513884.1  multiple PDZ domain protein isoform X1

  22. XM_054657919.2 → XP_054513894.1  multiple PDZ domain protein isoform X9

  23. XM_054657908.2 → XP_054513883.1  multiple PDZ domain protein isoform X1

RNA

  1. XR_010148765.1 RNA Sequence

  2. XR_010148764.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.