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LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [ Pan troglodytes (chimpanzee) ]

Gene ID: 472272, updated on 29-Mar-2024

Summary

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Official Symbol
LFNGprovided by VGNC
Official Full Name
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferaseprovided by VGNC
Primary source
VGNC:VGNC:14035
Locus tag
CK820_G0038336
See related
Ensembl:ENSPTRG00000018864
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (8481145..8490592)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (6252662..6263829)

Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene carbohydrate sulfotransferase 12 Neighboring gene galectin-related inter-fiber protein Neighboring gene small nucleolar RNA U13 Neighboring gene BRCA1 associated ATM activator 1 Neighboring gene IQ motif containing E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pattern specification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
XP_009440769.2
XP_016812505.2
XP_527647.4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    8481145..8490592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009442494.5 → XP_009440769.2  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe isoform X3

  2. XM_016957016.4 → XP_016812505.2  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe isoform X1

  3. XM_527647.8 → XP_527647.4  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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