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CSF2 colony stimulating factor 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 471627, updated on 29-Mar-2024

Summary

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Official Symbol
CSF2provided by VGNC
Official Full Name
colony stimulating factor 2provided by VGNC
Primary source
VGNC:VGNC:6847
Locus tag
CK820_G0026794
See related
Ensembl:ENSPTRG00000017212
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (129837842..129840222)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (129856403..129858783)

Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase long chain family member 6 Neighboring gene interleukin 3 Neighboring gene prolyl 4-hydroxylase subunit alpha 2 Neighboring gene short transmembrane mitochondrial protein 1-like Neighboring gene PDZ and LIM domain 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables granulocyte macrophage colony-stimulating factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myeloid cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
granulocyte-macrophage colony-stimulating factor
Names
colony stimulating factor 2 (granulocyte-macrophage)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    129837842..129840222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_527005.4 → XP_527005.2  granulocyte-macrophage colony-stimulating factor

    See identical proteins and their annotated locations for XP_527005.2

    UniProtKB/TrEMBL
    A0A2J8LS57, A0A6D2X6Y2, H2QRG1
    Related
    ENSPTRP00000029448.1
    Conserved Domains (1) summary
    cd00040
    Location:18 → 138
    CSF2; Granulocyte Macrophage Colony Stimulating Factor (GM-CSF) is a member of the large family of polypeptide growth factors called cytokines. It stimulates a wide variety of hematopoietic and nonhematopoietic cell types via binding to members of the cytokine ...
Nucleotide Protein
Heading Accession and Version

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