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SAP30 Sin3A associated protein 30 [ Pan troglodytes (chimpanzee) ]

Gene ID: 471351, updated on 29-Mar-2024

Summary

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Official Symbol
SAP30provided by VGNC
Official Full Name
Sin3A associated protein 30provided by VGNC
Primary source
VGNC:VGNC:2004
Locus tag
CK820_G0018042
See related
Ensembl:ENSPTRG00000016598
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (175049293..175055942)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (175008708..175015351)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene high mobility group box 2 Neighboring gene uncharacterized LOC134809930 Neighboring gene uncharacterized LOC134809931 Neighboring gene stimulator of chondrogenesis 1 Neighboring gene large ribosomal subunit protein uL18-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase complex subunit SAP30
Names
Sin3A-associated protein, 30kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    175049293..175055942
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_526733.9 → XP_526733.2  histone deacetylase complex subunit SAP30

    See identical proteins and their annotated locations for XP_526733.2

    UniProtKB/TrEMBL
    A0A2J8MQU8, A0A6D2X805, H2QQF7
    Related
    ENSPTRP00000028485.2
    Conserved Domains (2) summary
    pfam13866
    Location:65 → 133
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:153 → 205
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30
Nucleotide Protein
Heading Accession and Version

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