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IBSP integrin binding sialoprotein [ Pan troglodytes (chimpanzee) ]

Gene ID: 471249, updated on 29-Mar-2024

Summary

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Official Symbol
IBSPprovided by VGNC
Official Full Name
integrin binding sialoproteinprovided by VGNC
Primary source
VGNC:VGNC:6424
Locus tag
CK820_G0022089
See related
Ensembl:ENSPTRG00000016263
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (89171015..89181122)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (89170988..89181095)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like Neighboring gene uncharacterized LOC107974338 Neighboring gene matrix extracellular phosphoglycoprotein Neighboring gene heat shock protein HSP 90-beta-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in bone mineralization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ossification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bone sialoprotein 2
Names
integrin-binding sialoprotein (bone sialoprotein, bone sialoprotein II)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    89171015..89181122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016951848.3 → XP_016807337.1  bone sialoprotein 2

    UniProtKB/TrEMBL
    A0A2J8MA53, A0A6D2W1U2, H2QPV2
    Related
    ENSPTRP00000027934.3
    Conserved Domains (1) summary
    pfam05432
    Location:17 → 314
    BSP_II; Bone sialoprotein II (BSP-II)
Nucleotide Protein
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