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STAP1 signal transducing adaptor family member 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 471228, updated on 11-Apr-2024

Summary

Official Symbol
STAP1provided by VGNC
Official Full Name
signal transducing adaptor family member 1provided by VGNC
Primary source
VGNC:VGNC:691
Locus tag
CK820_G0003345
See related
Ensembl:ENSPTRG00000016098
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (62346740..62395357, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (62345256..62395242, complement)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like Neighboring gene ubiquitin like modifier activating enzyme 6 Neighboring gene small EDRK-rich factor 2-like Neighboring gene centromere protein C Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

Pathways from PubChem

General protein information

Preferred Names
signal-transducing adaptor protein 1
Names
BCR downstream signaling 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    62346740..62395357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063809602.1XP_063665672.1  signal-transducing adaptor protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8PEZ1, A0A6D2WLF3, H2QPJ3
  2. XM_526610.5XP_526610.1  signal-transducing adaptor protein 1 isoform X1

    See identical proteins and their annotated locations for XP_526610.1

    UniProtKB/TrEMBL
    A0A2J8PEZ1, A0A6D2WLF3, H2QPJ3
    Related
    ENSPTRP00000027687.2
    Conserved Domains (2) summary
    cd10403
    Location:176268
    SH2_STAP1; Src homology 2 domain found in Signal-transducing adaptor protein 1 (STAP1)
    cd13268
    Location:15139
    PH_Brdg1; BCR downstream signaling 1 Pleckstrin homology (PH) domain
  3. XM_063809603.1XP_063665673.1  signal-transducing adaptor protein 1 isoform X2

  4. XM_009447814.4XP_009446089.1  signal-transducing adaptor protein 1 isoform X3

    Conserved Domains (2) summary
    cd13268
    Location:15139
    PH_Brdg1; BCR downstream signaling 1 Pleckstrin homology (PH) domain
    cl15255
    Location:176247
    SH2; Src homology 2 (SH2) domain
  5. XM_009447813.4XP_009446088.1  signal-transducing adaptor protein 1 isoform X2

    Conserved Domains (2) summary
    cd10403
    Location:157249
    SH2_STAP1; Src homology 2 domain found in Signal-transducing adaptor protein 1 (STAP1)
    cl17171
    Location:15120
    PH-like; Pleckstrin homology-like domain

RNA

  1. XR_010156587.1 RNA Sequence