PLD1 phospholipase D1 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: PLD1provided by VGNC
Official Full Name: phospholipase D1provided by VGNC
Primary source: VGNC:VGNC:7084
Locus tag: CK820_G0006064
See related: Ensembl:ENSPTRG00000015626
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 3

Exon count:: 29

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	2	NC_086015.1 (174746561..174956490, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	3	NC_072401.1 (174655923..174865793, complement)

Chromosome 2 - NC_086015.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

SHGC-84621 (e-PCR)
- UniSTS:102946

A004G48 (e-PCR)
- UniSTS:17975

SHGC-32810 (e-PCR)
- UniSTS:45624

HSCZTH032 (e-PCR)
- UniSTS:64058

RH48111 (e-PCR)
- UniSTS:22857

PLD1_2295 (e-PCR)
- UniSTS:280915

A009V13 (e-PCR)
- UniSTS:39266

SHGC-77547 (e-PCR)
- UniSTS:83338

RH45153 (e-PCR)
- UniSTS:63630

SHGC-154070 (e-PCR)
- UniSTS:183702

RH68800 (e-PCR)
- UniSTS:31148

SHGC-14202 (e-PCR)
- UniSTS:57007

G32874 (e-PCR)
- UniSTS:117453

SHGC-148349 (e-PCR)
- UniSTS:176341

RH77864 (e-PCR)
- UniSTS:52711

SHGC-77542 (e-PCR)
- UniSTS:74485

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables phosphatidylinositol binding	IEA Inferred from Electronic Annotation more info	PubMed
enables phospholipase D activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in intracellular signal transduction	IEA Inferred from Electronic Annotation more info	PubMed
involved_in phosphatidic acid biosynthetic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in phospholipid catabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of microvillus assembly	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of vesicle-mediated transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in intracellular membrane-bounded organelle	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane region	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: phospholipase D1

Names: phospholipase D1, phophatidylcholine-specific; phospholipase D1, phosphatidylcholine-specific

XP_003310147.1

EC 3.1.4.4

XP_009445127.1

EC 3.1.4.4

XP_009445128.1

EC 3.1.4.4

XP_063663400.1

EC 3.1.4.4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

174746561..174956490 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)