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HTR1F 5-hydroxytryptamine receptor 1F [ Pan troglodytes (chimpanzee) ]

Gene ID: 470863, updated on 13-Apr-2024

Summary

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Official Symbol
HTR1Fprovided by VGNC
Official Full Name
5-hydroxytryptamine receptor 1Fprovided by VGNC
Primary source
VGNC:VGNC:53371
Locus tag
CK820_G0043959
See related
Ensembl:ENSPTRG00000015124
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
5-HT1F; 5-HT-1F
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (92109137..92302692)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (92018523..92212078)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene 26S proteasome regulatory subunit 4-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6atac minor spliceosomal RNA Neighboring gene uncharacterized LOC129135333 Neighboring gene CGG triplet repeat binding protein 1 Neighboring gene chromobox protein homolog 5-like Neighboring gene zinc finger protein 654

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenylate cyclase-inhibiting serotonin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-hydroxytryptamine receptor 1F
Names
5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled
serotonin receptor 1F

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195269.4 → NP_001182198.1  5-hydroxytryptamine receptor 1F

    See identical proteins and their annotated locations for NP_001182198.1

    Status: PROVISIONAL

    Source sequence(s)
    JAQQLN020000002
    UniProtKB/Swiss-Prot
    Q9N2D9
    UniProtKB/TrEMBL
    A0A2J8JWE7, A0A6D2WBC1, H2QMY5
    Related
    ENSPTRP00000026109.4, ENSPTRT00000028294.5
    Conserved Domains (1) summary
    cd15334
    Location:24 → 359
    7tmA_5-HT1F; serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    92109137..92302692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016940011.4 → XP_016795500.1  5-hydroxytryptamine receptor 1F isoform X1

    UniProtKB/Swiss-Prot
    Q9N2D9
    UniProtKB/TrEMBL
    A0A2J8JWE7, A0A6D2WBC1, H2QMY5
    Conserved Domains (1) summary
    cd15334
    Location:24 → 359
    7tmA_5-HT1F; serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_016940010.4 → XP_016795499.1  5-hydroxytryptamine receptor 1F isoform X1

    UniProtKB/Swiss-Prot
    Q9N2D9
    UniProtKB/TrEMBL
    A0A2J8JWE7, A0A6D2WBC1, H2QMY5
    Conserved Domains (1) summary
    cd15334
    Location:24 → 359
    7tmA_5-HT1F; serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors

RNA

  1. XR_001712983.4 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9N2D9.2 GenPept UniProtKB/Swiss-Prot:Q9N2D9

Gene LinkOut

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