ABCB11 ATP binding cassette subfamily B member 11 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: ABCB11provided by VGNC
Official Full Name: ATP binding cassette subfamily B member 11provided by VGNC
Primary source: VGNC:VGNC:47
Locus tag: CK820_G0001426
See related: Ensembl:ENSPTRG00000012609
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2B

Exon count:: 28

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	13	NC_072411.2 (70953918..71067506, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	2B	NC_072400.1 (70953878..71067466, complement)

Chromosome 13 - NC_072411.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

SHGC-80916 (e-PCR)
- UniSTS:102555

RH120938 (e-PCR)
- UniSTS:133797

ABCB11_675 (e-PCR)
- UniSTS:276947

D2S2060 (e-PCR)
- UniSTS:2023

MARC_23799-23800:1027535309:1 (e-PCR)
- UniSTS:268778

RH66728 (e-PCR)
- UniSTS:28153

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ABC-type oligopeptide transporter activity	IEA Inferred from Electronic Annotation more info	PubMed
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: bile salt export pump

Names: ATP-binding cassette, sub-family B (MDR/TAP), member 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072411.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

70953918..71067506 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_526100.7 → XP_526100.2 bile salt export pump isoform X1

UniProtKB/TrEMBL

A0A2I3TIB6, A0A2J8PQH1, A0A6D2WBF5, H2QIX8

Related

ENSPTRP00000088624.1

Conserved Domains (1) summary

cl28181
Location:21 → 1314

AAA; ATPases associated with a variety of cellular activities
XM_009443642.4 → XP_009441917.1 bile salt export pump isoform X2

UniProtKB/TrEMBL

H2QIX8

Conserved Domains (3) summary

cd03249
Location:1017 → 1256

ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins

PTZ00265
Location:87 → 1253

PTZ00265; multidrug resistance protein (mdr1); Provisional

pfam00664
Location:6 → 310

ABC_membrane; ABC transporter transmembrane region