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ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit [ Pan troglodytes (chimpanzee) ]

Gene ID: 470526, updated on 29-Mar-2024

Summary

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Official Symbol
ERCC3provided by VGNC
Official Full Name
ERCC excision repair 3, TFIIH core complex helicase subunitprovided by VGNC
Primary source
VGNC:VGNC:57421
Locus tag
CK820_G0024235
See related
Ensembl:ENSPTRG00000046940
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2B
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 13 NC_072411.2 (27936220..27973189, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2B NC_072400.1 (27936217..27973181, complement)

Chromosome 13 - NC_072411.2Genomic Context describing neighboring genes Neighboring gene cytochrome P450 27C1 Neighboring gene WW domain-binding protein 11-like Neighboring gene uncharacterized LOC107973761 Neighboring gene U6 spliceosomal RNA Neighboring gene mitogen-activated protein kinase kinase kinase 2 Neighboring gene uncharacterized LOC104005164

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hair cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleotide-excision repair factor 3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TFIIH basal transcription factor complex helicase XPB subunit; general transcription and DNA repair factor IIH helicase subunit XPB
Names
excision repair cross-complementation group 3
excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)
XP_016805162.1
XP_016805163.1
XP_016805165.1
XP_016805167.1
XP_063647107.1
XP_063647108.1
XP_063647109.1
XP_063647110.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072411.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    27936220..27973189 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016949674.4 → XP_016805163.1  general transcription and DNA repair factor IIH helicase subunit XPB isoform X2

    UniProtKB/TrEMBL
    A0A2J8M1R9, A0A6D2WYK0, K7AI54
    Related
    ENSPTRP00000087351.1
    Conserved Domains (1) summary
    TIGR00603
    Location:60 → 779
    rad25; DNA repair helicase rad25

  2. XM_063791038.1 → XP_063647108.1  general transcription and DNA repair factor IIH helicase subunit XPB isoform X6

  3. XM_016949678.4 → XP_016805167.1  general transcription and DNA repair factor IIH helicase subunit XPB isoform X4

  4. XM_063791040.1 → XP_063647110.1  general transcription and DNA repair factor IIH helicase subunit XPB isoform X8

  5. XM_063791037.1 → XP_063647107.1  general transcription and DNA repair factor IIH helicase subunit XPB isoform X5

  6. XM_016949673.4 → XP_016805162.1  general transcription and DNA repair factor IIH helicase subunit XPB isoform X1

  7. XM_063791039.1 → XP_063647109.1  general transcription and DNA repair factor IIH helicase subunit XPB isoform X7

  8. XM_016949676.4 → XP_016805165.1  general transcription and DNA repair factor IIH helicase subunit XPB isoform X3

Nucleotide Protein
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