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RAP1A RAP1A, member of RAS oncogene family [ Pan troglodytes (chimpanzee) ]

Gene ID: 469408, updated on 3-Apr-2024

Summary

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Official Symbol
RAP1Aprovided by VGNC
Official Full Name
RAP1A, member of RAS oncogene familyprovided by VGNC
Primary source
VGNC:VGNC:11815
Locus tag
CK820_G0043658
See related
Ensembl:ENSPTRG00000001102
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See RAP1A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (119472349..119566593, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (111732771..111826935)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134810624 Neighboring gene DEAD-box helicase 20 Neighboring gene inka box actin regulator 2 Neighboring gene U6 spliceosomal RNA Neighboring gene keratin, type I cytoskeletal 18-like Neighboring gene transmembrane and immunoglobulin domain containing 3 Neighboring gene U6 spliceosomal RNA Neighboring gene adenosine A3 receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rap protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to cAMP IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of synaptic vesicle exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rap-1A
XP_016781179.1
XP_016781184.1
XP_054541629.1
XP_054541635.1
XP_063671990.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    119472349..119566593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054685654.2 → XP_054541629.1  ras-related protein Rap-1A

    UniProtKB/TrEMBL
    A0A2I3T5X3, A0A2J8JX95, A0A6D2XKZ7

  2. XM_016925690.4 → XP_016781179.1  ras-related protein Rap-1A

    UniProtKB/TrEMBL
    A0A2I3T5X3, A0A2J8JX95, A0A2J8K4W0, A0A6D2XKZ7
    Conserved Domains (1) summary
    cd04175
    Location:3 → 167
    Rap1; Rap1 family GTPase consists of Rap1a and Rap1b isoforms

  3. XM_063815920.1 → XP_063671990.1  ras-related protein Rap-1A

    UniProtKB/TrEMBL
    A0A2I3T5X3, A0A2J8JX95, A0A6D2XKZ7

  4. XM_016925695.4 → XP_016781184.1  ras-related protein Rap-1A

    UniProtKB/TrEMBL
    A0A2I3T5X3, A0A2J8JX95, A0A2J8K4W0, A0A6D2XKZ7
    Related
    ENSPTRP00000084644.1
    Conserved Domains (1) summary
    cd04175
    Location:3 → 167
    Rap1; Rap1 family GTPase consists of Rap1a and Rap1b isoforms

  5. XM_054685660.2 → XP_054541635.1  ras-related protein Rap-1A

    UniProtKB/TrEMBL
    A0A2I3T5X3, A0A2J8JX95, A0A6D2XKZ7
Nucleotide Protein
Heading Accession and Version

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