KRT17 keratin 17 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: KRT17provided by VGNC
Official Full Name: keratin 17provided by VGNC
Primary source: VGNC:VGNC:12354
Locus tag: CK820_G0039028
See related: Ensembl:ENSPTRG00000009173
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as: K17; CK-17
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Genomic context

Location:: chromosome: 17

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	19	NC_072417.2 (26520258..26525399)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	17	NC_072415.1 (24704719..24709860)

Chromosome 19 - NC_072417.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH70981 (e-PCR)
- UniSTS:86578

RH98412 (e-PCR)
- UniSTS:84028

Krt17 (e-PCR), detects polymorphism
- UniSTS:547451

KRT17 (e-PCR)
- UniSTS:264089

SHGC-12962 (e-PCR)
- UniSTS:38047

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables structural molecule activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in epithelial cell differentiation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in intermediate filament organization	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info	PubMed
located_in keratin filament	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: keratin, type I cytoskeletal 17

Names: cytokeratin-17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001144837.2 → NP_001138309.1 keratin, type I cytoskeletal 17

See identical proteins and their annotated locations for NP_001138309.1

Status: PROVISIONAL

Source sequence(s)

AB222148

UniProtKB/Swiss-Prot

A5A6M0

UniProtKB/TrEMBL

A0A2J8KG77

Related

ENSPTRP00000015625.5, ENSPTRT00000016881.6

Conserved Domains (3) summary

pfam00038
Location:84 → 394

Filament; Intermediate filament protein

cl03075
Location:350 → 403

GrpE; nucleotide exchange factor GrpE

cl14876
Location:215 → 296

Zinc_peptidase_like; Zinc peptidases M18, M20, M28, and M42