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MMP15 matrix metallopeptidase 15 [ Pan troglodytes (chimpanzee) ]

Gene ID: 467988, updated on 29-Mar-2024

Summary

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Official Symbol
MMP15provided by VGNC
Official Full Name
matrix metallopeptidase 15provided by VGNC
Primary source
VGNC:VGNC:5838
Locus tag
CK820_G0016570
See related
Ensembl:ENSPTRG00000008173
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (56033607..56054741)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (56033345..56054639)

Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene sperm microtubule inner protein 8 Neighboring gene zinc finger protein 319 Neighboring gene U6 snRNA biogenesis phosphodiesterase 1 Neighboring gene TIMELESS-interacting protein-like Neighboring gene cilia and flagella associated protein 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrix metalloproteinase-15
Names
matrix metallopeptidase 15 (membrane-inserted)
matrix metalloproteinase 15
XP_009429160.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    56033607..56054741
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009430885.4 → XP_009429160.2  matrix metalloproteinase-15

    UniProtKB/TrEMBL
    A0A2J8MVS1, A0A6D2XPW3, H2QB81
    Related
    ENSPTRP00000013957.5
    Conserved Domains (4) summary
    cd00094
    Location:367 → 559
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    pfam00413
    Location:138 → 304
    Peptidase_M10; Matrixin
    pfam01471
    Location:53 → 106
    PG_binding_1; Putative peptidoglycan binding domain
    pfam11857
    Location:643 → 669
    DUF3377; Domain of unknown function (DUF3377)
Nucleotide Protein
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