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TNFSF11 TNF superfamily member 11 [ Pan troglodytes (chimpanzee) ]

Gene ID: 467353, updated on 3-Apr-2024

Summary

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Official Symbol
TNFSF11provided by VGNC
Official Full Name
TNF superfamily member 11provided by VGNC
Primary source
VGNC:VGNC:5125
Locus tag
CK820_G0019609
See related
Ensembl:ENSPTRG00000005827
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 14 NC_072412.2 (41643161..41677915)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 13 NC_072411.1 (36420832..36454643)

Chromosome 14 - NC_072412.2Genomic Context describing neighboring genes Neighboring gene A-kinase anchoring protein 11 Neighboring gene fatty acid-binding protein, heart-like Neighboring gene uncharacterized LOC134808211 Neighboring gene uncharacterized LOC134808124 Neighboring gene family with sequence similarity 216 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor ligand superfamily member 11
Names
tumor necrosis factor (ligand) superfamily, member 11
tumor necrosis factor superfamily member 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072412.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    41643161..41677915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_522750.5 → XP_522750.3  tumor necrosis factor ligand superfamily member 11 isoform X1

    UniProtKB/TrEMBL
    A0A2J8ML80, A0A2J8ML85, A0A6D2Y2T8, H2Q7H7
    Related
    ENSPTRP00000009919.3
    Conserved Domains (1) summary
    pfam00229
    Location:185 → 313
    TNF; TNF(tumor Necrosis Factor) family

  2. XM_063792101.1 → XP_063648171.1  tumor necrosis factor ligand superfamily member 11 isoform X3

    UniProtKB/TrEMBL
    A0A2J8ML88

  3. XM_063792100.1 → XP_063648170.1  tumor necrosis factor ligand superfamily member 11 isoform X2

Nucleotide Protein
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