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ELK3 ETS transcription factor ELK3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 467100, updated on 29-Mar-2024

Summary

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Official Symbol
ELK3provided by VGNC
Official Full Name
ETS transcription factor ELK3provided by VGNC
Primary source
VGNC:VGNC:8405
Locus tag
CK820_G0016193
See related
Ensembl:ENSPTRG00000005322
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (103032923..103108577)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (101653445..101728765)

Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene protein yippee-like 5 Neighboring gene uncharacterized LOC134807589 Neighboring gene uncharacterized LOC134807588 Neighboring gene U4 spliceosomal RNA Neighboring gene cyclin dependent kinase 17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ETS domain-containing protein Elk-3
Names
ELK3, ETS transcription factor
ELK3, ETS-domain protein (SRF accessory protein 2)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    103032923..103108577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001146444.7 → XP_001146444.1  ETS domain-containing protein Elk-3

    See identical proteins and their annotated locations for XP_001146444.1

    UniProtKB/TrEMBL
    A0A2J8N0M7, A0A6D2W4Y0, H2Q6N4
    Related
    ENSPTRP00000009042.2
    Conserved Domains (1) summary
    smart00413
    Location:19 → 88
    ETS; erythroblast transformation specific domain
Nucleotide Protein
Heading Accession and Version

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