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ABCD2 ATP binding cassette subfamily D member 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 466952, updated on 11-Apr-2024

Summary

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Official Symbol
ABCD2provided by VGNC
Official Full Name
ATP binding cassette subfamily D member 2provided by VGNC
Primary source
VGNC:VGNC:4912
Locus tag
CK820_G0027082
See related
Ensembl:ENSPTRG00000004825
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (56247977..56319437)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (54917924..54992665)

Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 13 Neighboring gene small nucleolar RNA SNORA22 Neighboring gene regulator of DNA class I crossover intermediates 1 Neighboring gene large ribosomal subunit protein eL8-like Neighboring gene kinesin family member 21A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import into peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peroxisome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family D member 2
Names
ATP-binding cassette, sub-family D (ALD), member 2
ATP-binding cassette, sub-family D, member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    56247977..56319437
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001168647.8 → XP_001168647.1  ATP-binding cassette sub-family D member 2 isoform X1

    See identical proteins and their annotated locations for XP_001168647.1

    UniProtKB/TrEMBL
    A0A2J8LR83, A0A6D2W0P4, H2Q5Q0
    Related
    ENSPTRP00000008247.2
    Conserved Domains (1) summary
    TIGR00954
    Location:40 → 685
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  2. XM_063785774.1 → XP_063641844.1  ATP-binding cassette sub-family D member 2 isoform X3

  3. XM_054664354.2 → XP_054520329.1  ATP-binding cassette sub-family D member 2 isoform X2

  4. XM_009425598.5 → XP_009423873.1  ATP-binding cassette sub-family D member 2 isoform X4

    Conserved Domains (1) summary
    TIGR00954
    Location:40 → 667
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
Nucleotide Protein
Heading Accession and Version

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