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ESRRA estrogen related receptor alpha [ Pan troglodytes (chimpanzee) ]

Gene ID: 466651, updated on 3-Apr-2024

Summary

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Official Symbol
ESRRAprovided by VGNC
Official Full Name
estrogen related receptor alphaprovided by VGNC
Primary source
VGNC:VGNC:6555
Locus tag
CK820_G0034026
See related
Ensembl:ENSPTRG00000003833
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (66620516..66631746)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (65731363..65742592)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene potassium two pore domain channel subfamily K member 4 Neighboring gene catsper channel auxiliary subunit zeta Neighboring gene tRNA methyltransferase activator subunit 11-2 Neighboring gene peroxiredoxin 5 Neighboring gene uncharacterized LOC107967111 Neighboring gene coiled-coil domain containing 88B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables estrogen response element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear steroid receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular steroid hormone receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
steroid hormone receptor ERR1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    66620516..66631746
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009423369.4 → XP_009421644.1  steroid hormone receptor ERR1 isoform X1

    See identical proteins and their annotated locations for XP_009421644.1

    UniProtKB/TrEMBL
    A0A2J8QCS6, A0A6D2W6G6, H2Q3Z7, K7DJ98
    Conserved Domains (2) summary
    cd06946
    Location:196 → 419
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:73 → 168
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  2. XM_522050.9 → XP_522050.3  steroid hormone receptor ERR1 isoform X1

    See identical proteins and their annotated locations for XP_522050.3

    UniProtKB/TrEMBL
    A0A2J8QCS6, A0A6D2W6G6, H2Q3Z7, K7DJ98
    Conserved Domains (2) summary
    cd06946
    Location:196 → 419
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:73 → 168
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  3. XM_063783001.1 → XP_063639071.1  steroid hormone receptor ERR1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8QCS6, A0A6D2W6G6, H2Q3Z7, K7DJ98

  4. XM_016921157.4 → XP_016776646.4  steroid hormone receptor ERR1 isoform X3

  5. XM_063783003.1 → XP_063639073.1  steroid hormone receptor ERR1 isoform X3

  6. XM_016921155.3 → XP_016776644.1  steroid hormone receptor ERR1 isoform X2

Nucleotide Protein
Heading Accession and Version

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