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PTPN5 protein tyrosine phosphatase non-receptor type 5 [ Pan troglodytes (chimpanzee) ]

Gene ID: 466462, updated on 29-Mar-2024

Summary

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Official Symbol
PTPN5provided by VGNC
Official Full Name
protein tyrosine phosphatase non-receptor type 5provided by VGNC
Primary source
VGNC:VGNC:7674
Locus tag
CK820_G0005621
See related
Ensembl:ENSPTRG00000003430
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (22767542..22830602, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (22631720..22694807, complement)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene serine/arginine-rich splicing factor 3-like Neighboring gene transmembrane protein 86A Neighboring gene immunoglobulin superfamily member 22 Neighboring gene uncharacterized LOC134807334 Neighboring gene mas-related G-protein coupled receptor member X3-like Neighboring gene monofunctional C1-tetrahydrofolate synthase, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-tyrosine dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 5
Names
protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
XP_003312997.1
XP_003312998.1
XP_003312999.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    22767542..22830602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003312951.7 → XP_003312999.1  tyrosine-protein phosphatase non-receptor type 5 isoform X2

    UniProtKB/TrEMBL
    A0A2I3TI07, A0A2J8P4P3
    Related
    ENSPTRP00000088872.1
    Conserved Domains (1) summary
    smart00194
    Location:275 → 528
    PTPc; Protein tyrosine phosphatase, catalytic domain

  2. XM_003312950.6 → XP_003312998.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    See identical proteins and their annotated locations for XP_003312998.1

    UniProtKB/TrEMBL
    A0A2I3TI07, A0A2J8P4P4, A0A6D2Y225, H2Q3A1
    Conserved Domains (1) summary
    smart00194
    Location:299 → 552
    PTPc; Protein tyrosine phosphatase, catalytic domain

  3. XM_003312949.6 → XP_003312997.1  tyrosine-protein phosphatase non-receptor type 5 isoform X1

    See identical proteins and their annotated locations for XP_003312997.1

    UniProtKB/TrEMBL
    A0A2I3TI07, A0A2J8P4P4, A0A6D2Y225, H2Q3A1
    Related
    ENSPTRP00000005972.3
    Conserved Domains (1) summary
    smart00194
    Location:299 → 552
    PTPc; Protein tyrosine phosphatase, catalytic domain
Nucleotide Protein
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