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FRAT1 FRAT regulator of WNT signaling pathway 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 466169, updated on 29-Mar-2024

Summary

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Official Symbol
FRAT1provided by VGNC
Official Full Name
FRAT regulator of WNT signaling pathway 1provided by VGNC
Primary source
VGNC:VGNC:14561
Locus tag
CK820_G0004207
See related
Ensembl:ENSPTRG00000051237
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 8 NC_072406.2 (109440878..109443439)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (100054305..100056856)

Chromosome 8 - NC_072406.2Genomic Context describing neighboring genes Neighboring gene slit guidance ligand 1 Neighboring gene uncharacterized LOC104008270 Neighboring gene Rho GTPase activating protein 19 Neighboring gene FRAT regulator of WNT signaling pathway 2 Neighboring gene ribosomal RNA processing 12 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proto-oncogene FRAT1
Names
FRAT1, WNT signaling pathway regulator
GSK-3 binding protein FRAT1
frequently rearranged in advanced T-cell lymphomas 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    109440878..109443439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_521571.8 → XP_521571.1  proto-oncogene FRAT1

    UniProtKB/TrEMBL
    A0A2I3SW18, A0A2J8PDT1, A0A6D2XZC2
    Related
    ENSPTRP00000081213.1
    Conserved Domains (1) summary
    pfam05350
    Location:1 → 239
    GSK-3_bind; Glycogen synthase kinase-3 binding
Nucleotide Protein
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