ZMIZ1 zinc finger MIZ-type containing 1 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: ZMIZ1provided by VGNC
Official Full Name: zinc finger MIZ-type containing 1provided by VGNC
Primary source: VGNC:VGNC:7872
Locus tag: CK820_G0007755
See related: Ensembl:ENSPTRG00000002668
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as: RAI17
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 29

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	8	NC_072406.2 (91281415..91529457)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	10	NC_072408.1 (81902738..82151051)

Chromosome 8 - NC_072406.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH68569 (e-PCR)
- UniSTS:14613

SHGC-132377 (e-PCR)
- UniSTS:170804

G28392 (e-PCR)
- UniSTS:7990

D10S1625 (e-PCR)
- UniSTS:154174

D10S1379E (e-PCR)
- UniSTS:151375

D10S201 (e-PCR)
- UniSTS:52824

SHGC-151018 (e-PCR)
- UniSTS:173200

RH70293 (e-PCR)
- UniSTS:71836

SHGC-141981 (e-PCR)
- UniSTS:171172

D10S1317E (e-PCR)
- UniSTS:15794

Zmiz1 (e-PCR), detects polymorphism
- UniSTS:528072

RH47546 (e-PCR)
- UniSTS:38607

D10S201 (e-PCR)
- UniSTS:13822

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables SUMO ligase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables nuclear receptor coactivator activity	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein sumoylation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of chromatin	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: zinc finger MIZ domain-containing protein 1

Names: retinoic acid induced 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

91281415..91529457

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_016918729.3 → XP_016774218.1 zinc finger MIZ domain-containing protein 1 isoform X2

UniProtKB/TrEMBL

A0A2J8NTU9, A0A803KIR4, K7BEX8

Conserved Domains (3) summary

pfam09606
Location:184 → 557

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cd16791
Location:739 → 786

SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

pfam18028
Location:8 → 100

Zmiz1_N; Zmiz1 N-terminal tetratricopeptide repeat domain
XM_016918726.4 → XP_016774215.1 zinc finger MIZ domain-containing protein 1 isoform X1

UniProtKB/TrEMBL

H2Q252, K6ZW30

Conserved Domains (3) summary

pfam09606
Location:184 → 563

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cd16791
Location:745 → 792

SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

pfam18028
Location:8 → 100

Zmiz1_N; Zmiz1 N-terminal tetratricopeptide repeat domain
XM_016918724.4 → XP_016774213.1 zinc finger MIZ domain-containing protein 1 isoform X1

UniProtKB/TrEMBL

H2Q252, K6ZW30

Conserved Domains (3) summary

pfam09606
Location:184 → 563

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cd16791
Location:745 → 792

SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

pfam18028
Location:8 → 100

Zmiz1_N; Zmiz1 N-terminal tetratricopeptide repeat domain
XM_016918730.4 → XP_016774219.1 zinc finger MIZ domain-containing protein 1 isoform X3

UniProtKB/TrEMBL

A0A2I3SUN5

Related

ENSPTRP00000080711.1

Conserved Domains (3) summary

pfam09606
Location:184 → 563

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cd16791
Location:745 → 792

SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

pfam18028
Location:8 → 100

Zmiz1_N; Zmiz1 N-terminal tetratricopeptide repeat domain
XM_063781914.1 → XP_063637984.1 zinc finger MIZ domain-containing protein 1 isoform X4
XM_016918727.4 → XP_016774216.1 zinc finger MIZ domain-containing protein 1 isoform X1

UniProtKB/TrEMBL

H2Q252, K6ZW30

Conserved Domains (3) summary

pfam09606
Location:184 → 563

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cd16791
Location:745 → 792

SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

pfam18028
Location:8 → 100

Zmiz1_N; Zmiz1 N-terminal tetratricopeptide repeat domain
XM_016918728.4 → XP_016774217.1 zinc finger MIZ domain-containing protein 1 isoform X1

UniProtKB/TrEMBL

H2Q252, K6ZW30

Related

ENSPTRP00000004646.5

Conserved Domains (3) summary

pfam09606
Location:184 → 563

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cd16791
Location:745 → 792

SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

pfam18028
Location:8 → 100

Zmiz1_N; Zmiz1 N-terminal tetratricopeptide repeat domain
XM_016918725.4 → XP_016774214.1 zinc finger MIZ domain-containing protein 1 isoform X1

UniProtKB/TrEMBL

H2Q252, K6ZW30

Conserved Domains (3) summary

pfam09606
Location:184 → 563

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cd16791
Location:745 → 792

SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins

pfam18028
Location:8 → 100

Zmiz1_N; Zmiz1 N-terminal tetratricopeptide repeat domain
XM_016918732.4 → XP_016774221.1 zinc finger MIZ domain-containing protein 1 isoform X5

Conserved Domains (2) summary

pfam09606
Location:60 → 439

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cd16791
Location:621 → 668

SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins
XM_063781915.1 → XP_063637985.1 zinc finger MIZ domain-containing protein 1 isoform X6
XM_063781916.1 → XP_063637986.1 zinc finger MIZ domain-containing protein 1 isoform X7
XM_063781917.1 → XP_063637987.1 zinc finger MIZ domain-containing protein 1 isoform X8
XM_016918734.3 → XP_016774223.1 zinc finger MIZ domain-containing protein 1 isoform X5

Conserved Domains (2) summary

pfam09606
Location:60 → 439

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cd16791
Location:621 → 668

SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins
XM_016918731.3 → XP_016774220.1 zinc finger MIZ domain-containing protein 1 isoform X5

Conserved Domains (2) summary

pfam09606
Location:60 → 439

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cd16791
Location:621 → 668

SP-RING_ZMIZ; SP-RING finger found in zinc finger MIZ domain-containing protein Zmiz1, Zmiz2, and similar proteins