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GYG2 glycogenin 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 465469, updated on 3-Apr-2024

Summary

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Official Symbol
GYG2provided by VGNC
Official Full Name
glycogenin 2provided by VGNC
Primary source
VGNC:VGNC:12391
Locus tag
CK820_G0053328
See related
Ensembl:ENSPTRG00000021625
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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Location:
chromosome: X
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) X NC_072421.2 (3217415..3270740)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) X NC_072421.1 (3213556..3266878)

Chromosome X - NC_072421.2Genomic Context describing neighboring genes Neighboring gene CD99 molecule (Xg blood group) Neighboring gene uncharacterized LOC134809349 Neighboring gene Xg glycoprotein Neighboring gene uncharacterized LOC129138884 Neighboring gene arylsulfatase D Neighboring gene arylsulfatase L

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-2
XP_024208745.1
XP_024208747.1
XP_024208748.1
XP_024208749.1
XP_024208750.1
XP_024208751.1
XP_024208752.1
XP_024208753.1
XP_063660832.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072421.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    3217415..3270740
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024352983.3 → XP_024208751.1  glycogenin-2 isoform X7

    Conserved Domains (1) summary
    cl11394
    Location:1 → 102
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_024352977.3 → XP_024208745.1  glycogenin-2 isoform X2

    UniProtKB/TrEMBL
    A0A2I3T5G4, A0A2J8ITK5, A0A2J8ITL3, A0A803KIR2, K7CHI8
    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  3. XM_024352979.3 → XP_024208747.1  glycogenin-2 isoform X3

    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  4. XM_063804762.1 → XP_063660832.1  glycogenin-2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8ITL0, A0A803KLK7, K7AFK4

  5. XM_024352981.3 → XP_024208749.1  glycogenin-2 isoform X5

    UniProtKB/TrEMBL
    A0A2I3SKP6
    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  6. XM_024352980.3 → XP_024208748.1  glycogenin-2 isoform X4

    UniProtKB/TrEMBL
    A0A2I3T5G4, A0A2J8ITL3
    Conserved Domains (1) summary
    cd02537
    Location:6 → 223
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  7. XM_024352982.3 → XP_024208750.1  glycogenin-2 isoform X6

    UniProtKB/TrEMBL
    A0A2I3S1P4, A0A2J8ITK9, A0A2J8ITL2, A0A6D2Y4D7
    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  8. XM_024352985.2 → XP_024208753.1  glycogenin-2 isoform X7

    Conserved Domains (1) summary
    cl11394
    Location:1 → 102
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  9. XM_024352984.3 → XP_024208752.1  glycogenin-2 isoform X7

    Conserved Domains (1) summary
    cl11394
    Location:1 → 102
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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