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DLL1 delta like canonical Notch ligand 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 465121, updated on 29-Mar-2024

Summary

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Official Symbol
DLL1provided by VGNC
Official Full Name
delta like canonical Notch ligand 1provided by VGNC
Primary source
VGNC:VGNC:52008
Locus tag
CK820_G0049548
See related
Ensembl:ENSPTRG00000018824
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (182376628..182385348, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (182375107..182384015, complement)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104007091 Neighboring gene uncharacterized LOC134810399 Neighboring gene family with sequence similarity 120 member B Neighboring gene uncharacterized LOC104007095 Neighboring gene uncharacterized LOC134810225

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-like protein 1
Names
delta-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    182376628..182385348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_520601.8 → XP_520601.2  delta-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_520601.2

    UniProtKB/TrEMBL
    A0A2J8JA34, A0A6D2WX87, H2QU26
    Related
    ENSPTRP00000032142.4
    Conserved Domains (3) summary
    smart00051
    Location:159 → 221
    DSL; delta serrate ligand
    cd00054
    Location:329 → 364
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07657
    Location:22 → 92
    MNNL; N terminus of Notch ligand

  2. XM_009452449.5 → XP_009450724.1  delta-like protein 1 isoform X2

    Conserved Domains (2) summary
    smart00051
    Location:60 → 122
    DSL; delta serrate ligand
    cd00054
    Location:230 → 265
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
Nucleotide Protein
Heading Accession and Version

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