SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: SH3GL2provided by VGNC
Official Full Name: SH3 domain containing GRB2 like 2, endophilin A1provided by VGNC
Primary source: VGNC:VGNC:10449
Locus tag: CK820_G0014464
See related: Ensembl:ENSPTRG00000020792
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 9

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	11	NC_072409.2 (98127462..98341591, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	9	NC_072407.1 (20527138..20741268)

Chromosome 11 - NC_072409.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

SHGC-153793 (e-PCR)
- UniSTS:177939

G63106 (e-PCR)
- UniSTS:140081

RH12259 (e-PCR)
- UniSTS:22666

T15988 (e-PCR)
- UniSTS:8370

RH47487 (e-PCR)
- UniSTS:80082

D9S157 (e-PCR), detects polymorphism
- UniSTS:12760

D9S157 (e-PCR), detects polymorphism
- UniSTS:28906

SHGC-84568 (e-PCR)
- UniSTS:102901

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in synaptic vesicle uncoating	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed
located_in glutamatergic synapse	IEA Inferred from Electronic Annotation more info	PubMed
located_in presynapse	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: endophilin-A1

Names: SH3-domain GRB2-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072409.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

98127462..98341591 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_520501.8 → XP_520501.3 endophilin-A1 isoform X1

See identical proteins and their annotated locations for XP_520501.3

UniProtKB/TrEMBL

A0A2I3SZG1, A0A2J8QSB8, A0A2J8QSC8, A0A6D2Y873

Related

ENSPTRP00000081977.1

Conserved Domains (2) summary

cd07613
Location:25 → 247

BAR_Endophilin_A1; The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-A1

cd11803
Location:293 → 347

SH3_Endophilin_A; Src homology 3 domain of Endophilin-A
XM_009456358.5 → XP_009454633.1 endophilin-A1 isoform X2

UniProtKB/TrEMBL

A0A2J8QSC8

Conserved Domains (2) summary

cd11803
Location:224 → 278

SH3_Endophilin_A; Src homology 3 domain of Endophilin-A

cl12013
Location:1 → 178

BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature