U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SPTAN1 spectrin alpha, non-erythrocytic 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464771, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
SPTAN1provided by VGNC
Official Full Name
spectrin alpha, non-erythrocytic 1provided by VGNC
Primary source
VGNC:VGNC:10107
Locus tag
CK820_G0012242
See related
Ensembl:ENSPTRG00000021433
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SPTAN1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
59
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 11 NC_072409.2 (9821398..9902489, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 9 NC_072407.1 (108966253..109047325)

Chromosome 11 - NC_072409.2Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 12 Neighboring gene protein kinase N3 Neighboring gene SET nuclear proto-oncogene Neighboring gene dynein 2 intermediate chain 2 Neighboring gene U7 small nuclear RNA Neighboring gene GLE1 RNA export mediator

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
spectrin alpha chain, non-erythrocytic 1
Names
spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072409.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    9821398..9902489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063788214.1 → XP_063644284.1  spectrin alpha chain, non-erythrocytic 1 isoform X20

    UniProtKB/TrEMBL
    A0A2J8NB73

  2. XM_063788205.1 → XP_063644275.1  spectrin alpha chain, non-erythrocytic 1 isoform X12

    UniProtKB/TrEMBL
    A0A2J8NBA1

  3. XM_063788216.1 → XP_063644286.1  spectrin alpha chain, non-erythrocytic 1 isoform X22

  4. XM_063788215.1 → XP_063644285.1  spectrin alpha chain, non-erythrocytic 1 isoform X21

    UniProtKB/TrEMBL
    A0A2J8NB70

  5. XM_063788206.1 → XP_063644276.1  spectrin alpha chain, non-erythrocytic 1 isoform X13

  6. XM_063788213.1 → XP_063644283.1  spectrin alpha chain, non-erythrocytic 1 isoform X20

    UniProtKB/TrEMBL
    A0A2J8NB73

  7. XM_063788202.1 → XP_063644272.1  spectrin alpha chain, non-erythrocytic 1 isoform X10

  8. XM_063788210.1 → XP_063644280.1  spectrin alpha chain, non-erythrocytic 1 isoform X17

  9. XM_063788207.1 → XP_063644277.1  spectrin alpha chain, non-erythrocytic 1 isoform X14

    UniProtKB/TrEMBL
    A0A2J8NB86

  10. XM_063788196.1 → XP_063644266.1  spectrin alpha chain, non-erythrocytic 1 isoform X4

  11. XM_063788208.1 → XP_063644278.1  spectrin alpha chain, non-erythrocytic 1 isoform X15

  12. XM_063788204.1 → XP_063644274.1  spectrin alpha chain, non-erythrocytic 1 isoform X12

    UniProtKB/TrEMBL
    A0A2J8NBA1

  13. XM_063788195.1 → XP_063644265.1  spectrin alpha chain, non-erythrocytic 1 isoform X3

    UniProtKB/TrEMBL
    A0A2J8NB75

  14. XM_063788198.1 → XP_063644268.1  spectrin alpha chain, non-erythrocytic 1 isoform X6

  15. XM_063788193.1 → XP_063644263.1  spectrin alpha chain, non-erythrocytic 1 isoform X1

  16. XM_063788212.1 → XP_063644282.1  spectrin alpha chain, non-erythrocytic 1 isoform X19

  17. XM_063788211.1 → XP_063644281.1  spectrin alpha chain, non-erythrocytic 1 isoform X18

  18. XM_063788199.1 → XP_063644269.1  spectrin alpha chain, non-erythrocytic 1 isoform X7

  19. XM_063788209.1 → XP_063644279.1  spectrin alpha chain, non-erythrocytic 1 isoform X16

  20. XM_063788197.1 → XP_063644267.1  spectrin alpha chain, non-erythrocytic 1 isoform X5

  21. XM_063788203.1 → XP_063644273.1  spectrin alpha chain, non-erythrocytic 1 isoform X11

  22. XM_063788200.1 → XP_063644270.1  spectrin alpha chain, non-erythrocytic 1 isoform X8

  23. XM_063788194.1 → XP_063644264.1  spectrin alpha chain, non-erythrocytic 1 isoform X2

  24. XM_063788201.1 → XP_063644271.1  spectrin alpha chain, non-erythrocytic 1 isoform X9

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.