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PLEC plectin [ Pan troglodytes (chimpanzee) ]

Gene ID: 464454, updated on 29-Mar-2024

Summary

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Official Symbol
PLECprovided by VGNC
Official Full Name
plectinprovided by VGNC
Primary source
VGNC:VGNC:821
Locus tag
CK820_G0029279
See related
Ensembl:ENSPTRG00000020672
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
PLEC1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
44
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (154274782..154336585, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (158872815..158934348, complement)

Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134810697 Neighboring gene uncharacterized LOC134810696 Neighboring gene uncharacterized LOC134810698 Neighboring gene microRNA mir-661 Neighboring gene poly(ADP-ribose) polymerase family member 10 Neighboring gene uncharacterized LOC129135801 Neighboring gene glutamate ionotropic receptor NMDA type subunit associated protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ankyrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemidesmosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in hemidesmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin-1; plectin
Names
plectin 1, intermediate filament binding protein 500kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    154274782..154336585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054657584.2 → XP_054513559.2  plectin isoform X35

  2. XM_024345359.3 → XP_024201127.3  plectin isoform X14

  3. XM_063816657.1 → XP_063672727.1  plectin isoform X15

  4. XM_024345358.3 → XP_024201126.3  plectin isoform X13

  5. XM_024345357.3 → XP_024201125.3  plectin isoform X11

  6. XM_063816656.1 → XP_063672726.1  plectin isoform X11

  7. XM_024345371.3 → XP_024201139.3  plectin isoform X28

  8. XM_024345366.3 → XP_024201134.3  plectin isoform X21

  9. XM_024345364.3 → XP_024201132.3  plectin isoform X19

  10. XM_024345372.3 → XP_024201140.3  plectin isoform X29

  11. XM_024345369.3 → XP_024201137.3  plectin isoform X26

  12. XM_024345354.3 → XP_024201122.3  plectin isoform X12

  13. XM_009456141.5 → XP_009454416.3  plectin isoform X10

  14. XM_024345355.3 → XP_024201123.3  plectin isoform X8

  15. XM_024345356.3 → XP_024201124.3  plectin isoform X9

  16. XM_024345370.3 → XP_024201138.3  plectin isoform X27

  17. XM_024345373.3 → XP_024201141.3  plectin isoform X30

  18. XM_024345374.3 → XP_024201142.3  plectin isoform X33

  19. XM_024345378.3 → XP_024201146.3  plectin isoform X32

  20. XM_024345375.3 → XP_024201143.3  plectin isoform X31

  21. XM_063816661.1 → XP_063672731.1  plectin isoform X25

  22. XM_024345367.3 → XP_024201135.3  plectin isoform X23

  23. XM_024345362.3 → XP_024201130.3  plectin isoform X18

  24. XM_024345365.3 → XP_024201133.3  plectin isoform X20

  25. XM_024345360.3 → XP_024201128.3  plectin isoform X34

  26. XM_063816654.1 → XP_063672724.1  plectin isoform X7

  27. XM_024345353.3 → XP_024201121.3  plectin isoform X6

  28. XM_024345350.3 → XP_024201118.3  plectin isoform X2

  29. XM_024345351.3 → XP_024201119.3  plectin isoform X3

  30. XM_063816653.1 → XP_063672723.1  plectin isoform X5

  31. XM_024345352.3 → XP_024201120.3  plectin isoform X4

  32. XM_024345349.3 → XP_024201117.3  plectin isoform X1

  33. XM_063816660.1 → XP_063672730.1  plectin isoform X24

  34. XM_024345368.3 → XP_024201136.3  plectin isoform X22

  35. XM_024345363.3 → XP_024201131.3  plectin isoform X17

  36. XM_024345361.3 → XP_024201129.3  plectin isoform X16

Nucleotide Protein
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