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PDE7A phosphodiesterase 7A [ Pan troglodytes (chimpanzee) ]

Gene ID: 464213, updated on 3-Apr-2024

Summary

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Official Symbol
PDE7Aprovided by VGNC
Official Full Name
phosphodiesterase 7Aprovided by VGNC
Primary source
VGNC:VGNC:817
Locus tag
CK820_G0034518
See related
Ensembl:ENSPTRG00000030991
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (74361306..74487843, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (79371983..79499007, complement)

Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene armadillo repeat containing 1 Neighboring gene mitochondrial fission regulator 1 Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene transcription factor NF-E4-like Neighboring gene uncharacterized LOC104007631 Neighboring gene uncharacterized LOC129135727 Neighboring gene DnaJ heat shock protein family (Hsp40) member C5 beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-AMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cAMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A; high affinity 3',5'-cyclic-AMP phosphodiesterase 7A
Names
high-affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A
XP_001160058.2
XP_016815012.1
XP_054512770.1
XP_063672401.1
XP_063672402.1
XP_063672403.1
XP_063672404.1
XP_063672405.1
XP_063672406.1
XP_063672407.1
XP_063672408.1
XP_063672409.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    74361306..74487843 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063816332.1 → XP_063672402.1  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X2

  2. XM_063816331.1 → XP_063672401.1  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X1

  3. XM_016959523.3 → XP_016815012.1  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X4

    UniProtKB/TrEMBL
    A0A2I3RKX4, A0A2J8KZM6, A0A2J8KZN0, A0A6D2Y1I8
    Conserved Domains (2) summary
    pfam00233
    Location:185 → 405
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam09195
    Location:16 → 101
    Endonuc-BglII; Restriction endonuclease BglII

  4. XM_063816335.1 → XP_063672405.1  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X5

  5. XM_063816336.1 → XP_063672406.1  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X5

  6. XM_063816338.1 → XP_063672408.1  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X5

  7. XM_063816334.1 → XP_063672404.1  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X5

  8. XM_001160058.8 → XP_001160058.2  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X3

    See identical proteins and their annotated locations for XP_001160058.2

    UniProtKB/TrEMBL
    A0A2J8KZM6, A0A2J8KZM8, A0A6D2W9W7, H2R9T1, K6ZBE9
    Related
    ENSPTRP00000053148.4
    Conserved Domains (1) summary
    pfam00233
    Location:211 → 444
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  9. XM_063816337.1 → XP_063672407.1  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X5

  10. XM_063816333.1 → XP_063672403.1  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X4

    UniProtKB/TrEMBL
    A0A2I3RKX4, A0A2J8KZN0, A0A6D2Y1I8

  11. XM_054656795.2 → XP_054512770.1  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X5

  12. XM_063816339.1 → XP_063672409.1  high affinity 3',5'-cyclic-AMP phosphodiesterase 7A isoform X5

RNA

  1. XR_010159246.1 RNA Sequence

Nucleotide Protein
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