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CUL1 cullin 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 463821, updated on 3-Apr-2024

Summary

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Official Symbol
CUL1provided by VGNC
Official Full Name
cullin 1provided by VGNC
Primary source
VGNC:VGNC:4326
Locus tag
CK820_G0014217
See related
Ensembl:ENSPTRG00000019836
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
cullin-1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (163850520..163953219)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (157921587..158024308)

Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129135575 Neighboring gene chromosome 7 C7orf33 homolog Neighboring gene huntingtin-interacting protein K-like Neighboring gene U7 small nuclear RNA Neighboring gene enhancer of zeste 2 polycomb repressive complex 2 subunit Neighboring gene protein disulfide isomerase family A member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cullin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001246604.1 → NP_001233533.1  cullin-1

    See identical proteins and their annotated locations for NP_001233533.1

    Status: PROVISIONAL

    Source sequence(s)
    AK305091
    UniProtKB/TrEMBL
    A0A2J8QUP0, A0A6D2XZM8, G2HEC7, G2HJJ2
    Related
    ENSPTRP00000033967.4, ENSPTRT00000036732.5
    Conserved Domains (2) summary
    pfam00888
    Location:21 → 660
    Cullin; Cullin family
    pfam10557
    Location:706 → 767
    Cullin_Nedd8; Cullin protein neddylation domain

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    163850520..163953219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016945399.3 → XP_016800888.1  cullin-1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8QUP0, A0A6D2XZM8, G2HEC7, G2HJJ2
    Conserved Domains (2) summary
    pfam00888
    Location:21 → 660
    Cullin; Cullin family
    pfam10557
    Location:706 → 767
    Cullin_Nedd8; Cullin protein neddylation domain

  2. XM_054687149.2 → XP_054543124.1  cullin-1 isoform X2

  3. XM_016945395.3 → XP_016800884.1  cullin-1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8QUP0, A0A6D2XZM8, G2HEC7, G2HJJ2
    Conserved Domains (2) summary
    pfam00888
    Location:21 → 660
    Cullin; Cullin family
    pfam10557
    Location:706 → 767
    Cullin_Nedd8; Cullin protein neddylation domain

  4. XM_016945398.3 → XP_016800887.1  cullin-1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8QUP0, A0A6D2XZM8, G2HEC7, G2HJJ2
    Related
    ENSPTRP00000086353.1
    Conserved Domains (2) summary
    pfam00888
    Location:21 → 660
    Cullin; Cullin family
    pfam10557
    Location:706 → 767
    Cullin_Nedd8; Cullin protein neddylation domain

  5. XM_054687148.2 → XP_054543123.1  cullin-1 isoform X2

  6. XM_054687145.2 → XP_054543120.1  cullin-1 isoform X2

  7. XM_016945394.3 → XP_016800883.1  cullin-1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8QUP0, A0A6D2XZM8, G2HEC7, G2HJJ2
    Conserved Domains (2) summary
    pfam00888
    Location:21 → 660
    Cullin; Cullin family
    pfam10557
    Location:706 → 767
    Cullin_Nedd8; Cullin protein neddylation domain

  8. XM_054687144.2 → XP_054543119.1  cullin-1 isoform X2

  9. XM_016945396.4 → XP_016800885.1  cullin-1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8QUP0, A0A6D2XZM8, G2HEC7, G2HJJ2
    Conserved Domains (2) summary
    pfam00888
    Location:21 → 660
    Cullin; Cullin family
    pfam10557
    Location:706 → 767
    Cullin_Nedd8; Cullin protein neddylation domain

  10. XM_054687146.2 → XP_054543121.1  cullin-1 isoform X2

RNA

  1. XR_010158317.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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