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CAV1 caveolin 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 463670, updated on 3-Apr-2024

Summary

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Official Symbol
CAV1provided by VGNC
Official Full Name
caveolin 1provided by VGNC
Primary source
VGNC:VGNC:4295
Locus tag
CK820_G0011826
See related
Ensembl:ENSPTRG00000019613
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (131909089..131945202)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (125960244..125996362)

Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107975924 Neighboring gene caveolin 2 Neighboring gene uncharacterized LOC104007375 Neighboring gene U7 small nuclear RNA Neighboring gene MET proto-oncogene, receptor tyrosine kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analyses of multi-species sequences from targeted genomic regions. Thomas JW, et al. Nature, 2003 Aug 14. PMID 12917688

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in caveola assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of endothelial cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in caveola IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caveolin-1
Names
caveolin 1, caveolae protein, 22kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135818.1 → NP_001129290.1  caveolin-1

    See identical proteins and their annotated locations for NP_001129290.1

    Status: PROVISIONAL

    Source sequence(s)
    DP000016
    UniProtKB/Swiss-Prot
    Q2QLF2
    UniProtKB/TrEMBL
    A0A2J8QXH9, A0A663DAS5, K7BUZ8
    Conserved Domains (1) summary
    pfam01146
    Location:45 → 175
    Caveolin

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    131909089..131945202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009454022.5 → XP_009452297.1  caveolin-1 isoform X1

    See identical proteins and their annotated locations for XP_009452297.1

    UniProtKB/TrEMBL
    A0A2I3TQJ9, A0A2J8QXH6, A0A2J8QXH7, A0A6D2VUH7
    Related
    ENSPTRP00000091213.1
    Conserved Domains (1) summary
    pfam01146
    Location:14 → 144
    Caveolin

  2. XM_063813848.1 → XP_063669918.1  caveolin-1 isoform X1

    UniProtKB/TrEMBL
    A0A2I3TQJ9, A0A2J8QXH6, A0A6D2VUH7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2QLF2.1 GenPept UniProtKB/Swiss-Prot:Q2QLF2

Gene LinkOut

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Research Materials
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