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REPS1 RALBP1 associated Eps domain containing 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 463031, updated on 3-Apr-2024

Summary

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Official Symbol
REPS1provided by VGNC
Official Full Name
RALBP1 associated Eps domain containing 1provided by VGNC
Primary source
VGNC:VGNC:3681
Locus tag
CK820_G0000149
See related
Ensembl:ENSPTRG00000018654
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (150757774..150840938, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (150756257..150839416, complement)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104007004 Neighboring gene coiled-coil domain containing 28A Neighboring gene epithelial cell transforming 2 like Neighboring gene U6 spliceosomal RNA Neighboring gene ABRA C-terminal like Neighboring gene hdc homolog, cell cycle regulator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in clathrin-dependent synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ralBP1-associated Eps domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    150757774..150840938 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054686358.2 → XP_054542333.1  ralBP1-associated Eps domain-containing protein 1 isoform X4

  2. XM_518769.7 → XP_518769.2  ralBP1-associated Eps domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8PSG7, A0A2J8PSI1
    Conserved Domains (3) summary
    smart00027
    Location:278 → 369
    EH; Eps15 homology domain
    cl26386
    Location:97 → 228
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  3. XM_009452101.5 → XP_009450376.1  ralBP1-associated Eps domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_009450376.1

    UniProtKB/TrEMBL
    A0A2J8PSI1, A0A2J8PSJ5, A0A6D2XXQ4, H2QTU1, K7DL33
    Related
    ENSPTRP00000031840.5
    Conserved Domains (3) summary
    smart00027
    Location:278 → 369
    EH; Eps15 homology domain
    cl26386
    Location:97 → 228
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  4. XM_054686362.2 → XP_054542337.1  ralBP1-associated Eps domain-containing protein 1 isoform X15

  5. XM_009452105.4 → XP_009450380.1  ralBP1-associated Eps domain-containing protein 1 isoform X11

    UniProtKB/TrEMBL
    A0A2J8PSI1
    Related
    ENSPTRP00000083291.1
    Conserved Domains (4) summary
    smart00027
    Location:278 → 369
    EH; Eps15 homology domain
    cd00052
    Location:289 → 355
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    pfam05934
    Location:615 → 707
    MCLC; Mid-1-related chloride channel (MCLC)
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  6. XM_054686361.2 → XP_054542336.1  ralBP1-associated Eps domain-containing protein 1 isoform X14

  7. XM_001171879.6 → XP_001171879.1  ralBP1-associated Eps domain-containing protein 1 isoform X10

    See identical proteins and their annotated locations for XP_001171879.1

    UniProtKB/TrEMBL
    A0A2J8PSH3, A0A2J8PSI1, A0A6D2XWS1, K7BZS3
    Related
    ENSPTRP00000090834.1
    Conserved Domains (3) summary
    smart00027
    Location:278 → 369
    EH; Eps15 homology domain
    cl26386
    Location:97 → 228
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  8. XM_063813506.1 → XP_063669576.1  ralBP1-associated Eps domain-containing protein 1 isoform X8

  9. XM_009452102.4 → XP_009450377.1  ralBP1-associated Eps domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A2J8PSI1
    Conserved Domains (4) summary
    smart00027
    Location:278 → 369
    EH; Eps15 homology domain
    cd00052
    Location:289 → 355
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    pfam05934
    Location:642 → 734
    MCLC; Mid-1-related chloride channel (MCLC)
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  10. XM_063813507.1 → XP_063669577.1  ralBP1-associated Eps domain-containing protein 1 isoform X9

  11. XM_009452104.4 → XP_009450379.1  ralBP1-associated Eps domain-containing protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A2J8PSI1
    Conserved Domains (4) summary
    smart00027
    Location:278 → 369
    EH; Eps15 homology domain
    cd00052
    Location:289 → 355
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    pfam05934
    Location:643 → 735
    MCLC; Mid-1-related chloride channel (MCLC)
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  12. XM_009452103.4 → XP_009450378.1  ralBP1-associated Eps domain-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A2J8PSI1
    Conserved Domains (4) summary
    smart00027
    Location:257 → 348
    EH; Eps15 homology domain
    cd00052
    Location:268 → 334
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    pfam05934
    Location:622 → 714
    MCLC; Mid-1-related chloride channel (MCLC)
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  13. XM_054686359.2 → XP_054542334.1  ralBP1-associated Eps domain-containing protein 1 isoform X12

  14. XM_054686360.2 → XP_054542335.1  ralBP1-associated Eps domain-containing protein 1 isoform X13

  15. XM_063813505.1 → XP_063669575.1  ralBP1-associated Eps domain-containing protein 1 isoform X6

Nucleotide Protein
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