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ZNF318 zinc finger protein 318 [ Pan troglodytes (chimpanzee) ]

Gene ID: 462712, updated on 29-Mar-2024

Summary

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Official Symbol
ZNF318provided by VGNC
Official Full Name
zinc finger protein 318provided by VGNC
Primary source
VGNC:VGNC:7946
Locus tag
CK820_G0007257
See related
Ensembl:ENSPTRG00000018196
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (49230314..49263947, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (49230320..49263849, complement)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 7 Neighboring gene cysteine rich protein 3 Neighboring gene large ribosomal subunit protein eL34-like Neighboring gene small ribosomal subunit protein uS5-like Neighboring gene uncharacterized LOC107975146 Neighboring gene ATP binding cassette subfamily C member 10 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene delta like non-canonical Notch ligand 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 318

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    49230314..49263947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016955560.4 → XP_016811049.1  zinc finger protein 318

    UniProtKB/TrEMBL
    A0A2J8P070, A0A6D2XY93, H2R796
    Related
    ENSPTRP00000050105.3
    Conserved Domains (5) summary
    smart00451
    Location:1133 → 1167
    ZnF_U1; U1-like zinc finger
    cl25732
    Location:881 → 980
    SMC_N; RecF/RecN/SMC N terminal domain
    cl26511
    Location:877 → 1346
    Neuromodulin_N; Gap junction protein N-terminal region
    cl27975
    Location:684 → 876
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)
    cl28033
    Location:52 → 143
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
Nucleotide Protein
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