PPP2R5D protein phosphatase 2 regulatory subunit B'delta [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: PPP2R5Dprovided by VGNC
Official Full Name: protein phosphatase 2 regulatory subunit B'deltaprovided by VGNC
Primary source: VGNC:VGNC:13034
Locus tag: CK820_G0007239
See related: Ensembl:ENSPTRG00000018180
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 16

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	5	NC_072403.2 (48878657..48906611)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	6	NC_072404.1 (48878795..48906617)

Chromosome 5 - NC_072403.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

RH144000 (e-PCR)
- UniSTS:233246

STS-D78360 (e-PCR)
- UniSTS:64833

PPP2R5D_1544 (e-PCR)
- UniSTS:277612

STS-L76702 (e-PCR)
- UniSTS:32928

WI-18871 (e-PCR)
- UniSTS:33986

MEA (e-PCR)
- UniSTS:278734

RH46598 (e-PCR)
- UniSTS:7124

UniSTS:143850 (e-PCR)
- UniSTS:143850

Mea1 (e-PCR), detects polymorphism
- UniSTS:143850

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein phosphatase activator activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein dephosphorylation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in signal transduction	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytosol	IEA Inferred from Electronic Annotation more info	PubMed
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed
part_of protein phosphatase type 2A complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

48878657..48906611

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_518483.9 → XP_518483.4 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform X1
XM_063812436.1 → XP_063668506.1 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform X2