U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RING1 ring finger protein 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 462604, updated on 29-Mar-2024

Summary

Official Symbol
RING1provided by VGNC
Official Full Name
ring finger protein 1provided by VGNC
Primary source
VGNC:VGNC:11205
Locus tag
CK820_G0006977
See related
Ensembl:ENSPTRG00000018037
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (39092429..39096628)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (39092420..39096635)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene hydroxysteroid 17-beta dehydrogenase 8 Neighboring gene microRNA mir-219-1 Neighboring gene uncharacterized LOC134810289 Neighboring gene VPS52 subunit of GARP complex

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of PcG protein complex IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
E3 ubiquitin-protein ligase RING1
Names
RING-type E3 ubiquitin transferase RING1
polycomb complex protein RING1
NP_001074951.1
XP_009449124.1
XP_016810147.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081482.1NP_001074951.1  E3 ubiquitin-protein ligase RING1

    See identical proteins and their annotated locations for NP_001074951.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ977325
    UniProtKB/Swiss-Prot
    A2T6X5
    Conserved Domains (2) summary
    pfam00097
    Location:1958
    zf-C3HC4; Zinc finger, C3HC4 type (RING finger)
    pfam16207
    Location:251371
    RAWUL; RAWUL domain RING finger- and WD40-associated ubiquitin-like

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    39092429..39096628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009450849.5XP_009449124.1  E3 ubiquitin-protein ligase RING1 isoform X1

    See identical proteins and their annotated locations for XP_009449124.1

    UniProtKB/TrEMBL
    A0A2J8NYG8, A0A6D2VS75, K7A018
    Related
    ENSPTRP00000056938.2
    Conserved Domains (2) summary
    cd16739
    Location:4790
    RING-HC_RING1; RING finger, HC subclass, found in really interesting new gene 1 protein (RING1) and similar proteins
    cd17166
    Location:261400
    RAWUL_RING1; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in really interesting new gene 1 protein (RING1)
  2. XM_016954658.4XP_016810147.1  E3 ubiquitin-protein ligase RING1 isoform X2

    Conserved Domains (2) summary
    cd17166
    Location:189328
    RAWUL_RING1; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in really interesting new gene 1 protein (RING1)
    cl17238
    Location:4480
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain