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TNIP1 TNFAIP3 interacting protein 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 462197, updated on 3-Apr-2024

Summary

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Official Symbol
TNIP1provided by VGNC
Official Full Name
TNFAIP3 interacting protein 1provided by VGNC
Primary source
VGNC:VGNC:4206
Locus tag
CK820_G0010105
See related
Ensembl:ENSPTRG00000017428
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (148755223..148812769, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (148769474..148826647, complement)

Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134809988 Neighboring gene glutathione peroxidase 3 Neighboring gene annexin A6 Neighboring gene uncharacterized LOC134809989

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mitogen-activated protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to lipopolysaccharide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TNFAIP3-interacting protein 1
Names
Nef-associated factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    148755223..148812769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063810814.1 → XP_063666884.1  TNFAIP3-interacting protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A2I3RSQ5, A0A2J8NJQ1, A0A6D2XYE7

  2. XM_063810832.1 → XP_063666902.1  TNFAIP3-interacting protein 1 isoform X13

  3. XM_063810829.1 → XP_063666899.1  TNFAIP3-interacting protein 1 isoform X12

    UniProtKB/TrEMBL
    A0A2J8NJQ8, A0A6D2Y2Y7, H2QRT7

  4. XM_063810817.1 → XP_063666887.1  TNFAIP3-interacting protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A2J8NJR7

  5. XM_063810823.1 → XP_063666893.1  TNFAIP3-interacting protein 1 isoform X9

    UniProtKB/TrEMBL
    A0A2J8NJQ4, A0A803KLC0, K7CRT9

  6. XM_063810820.1 → XP_063666890.1  TNFAIP3-interacting protein 1 isoform X9

    UniProtKB/TrEMBL
    A0A2J8NJQ4, A0A803KLC0, K7CRT9

  7. XM_063810813.1 → XP_063666883.1  TNFAIP3-interacting protein 1 isoform X5

  8. XM_054684706.2 → XP_054540681.1  TNFAIP3-interacting protein 1 isoform X1

  9. XM_063810815.1 → XP_063666885.1  TNFAIP3-interacting protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A2I3RSQ5, A0A2J8NJQ1, A0A6D2XYE7

  10. XM_063810825.1 → XP_063666895.1  TNFAIP3-interacting protein 1 isoform X10

    UniProtKB/TrEMBL
    A0A2J8NJQ2

  11. XM_063810827.1 → XP_063666897.1  TNFAIP3-interacting protein 1 isoform X11

  12. XM_063810833.1 → XP_063666903.1  TNFAIP3-interacting protein 1 isoform X14

  13. XM_063810839.1 → XP_063666909.1  TNFAIP3-interacting protein 1 isoform X16

  14. XM_063810837.1 → XP_063666907.1  TNFAIP3-interacting protein 1 isoform X15

  15. XM_063810835.1 → XP_063666905.1  TNFAIP3-interacting protein 1 isoform X14

  16. XM_054684714.2 → XP_054540689.1  TNFAIP3-interacting protein 1 isoform X8

  17. XM_063810821.1 → XP_063666891.1  TNFAIP3-interacting protein 1 isoform X9

    UniProtKB/TrEMBL
    A0A2J8NJQ4, A0A803KLC0, K7CRT9

  18. XM_063810818.1 → XP_063666888.1  TNFAIP3-interacting protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A2J8NJR7

  19. XM_063810831.1 → XP_063666901.1  TNFAIP3-interacting protein 1 isoform X12

    UniProtKB/TrEMBL
    A0A2J8NJQ8, A0A6D2Y2Y7, H2QRT7

  20. XM_063810824.1 → XP_063666894.1  TNFAIP3-interacting protein 1 isoform X9

    UniProtKB/TrEMBL
    A0A2J8NJQ4, A0A803KLC0, K7CRT9

  21. XM_063810812.1 → XP_063666882.1  TNFAIP3-interacting protein 1 isoform X1

  22. XM_001167619.7 → XP_001167619.1  TNFAIP3-interacting protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A2I3SHK0, A0A2J8NJR7
    Conserved Domains (1) summary
    cl25732
    Location:213 → 517
    SMC_N; RecF/RecN/SMC N terminal domain

  23. XM_003310917.7 → XP_003310965.1  TNFAIP3-interacting protein 1 isoform X6

    See identical proteins and their annotated locations for XP_003310965.1

    UniProtKB/TrEMBL
    A0A2I3RSQ5, A0A2I3SHK0, A0A2J8NJQ1, A0A6D2XYE7
    Related
    ENSPTRP00000067669.1
    Conserved Domains (1) summary
    cl25732
    Location:213 → 517
    SMC_N; RecF/RecN/SMC N terminal domain

  24. XM_016954075.4 → XP_016809564.1  TNFAIP3-interacting protein 1 isoform X9

    UniProtKB/TrEMBL
    A0A2I3SHK0, A0A2J8NJQ4, A0A803KLC0, K7CRT9
    Conserved Domains (3) summary
    pfam15058
    Location:26 → 149
    Speriolin_N; Speriolin N terminus
    cl19252
    Location:214 → 251
    MreC; rod shape-determining protein MreC
    cl25732
    Location:298 → 538
    SMC_N; RecF/RecN/SMC N terminal domain

  25. XM_518040.8 → XP_518040.3  TNFAIP3-interacting protein 1 isoform X9

    See identical proteins and their annotated locations for XP_518040.3

    UniProtKB/TrEMBL
    A0A2I3SHK0, A0A2J8NJQ4, A0A803KLC0, K7CRT9
    Conserved Domains (3) summary
    pfam15058
    Location:26 → 149
    Speriolin_N; Speriolin N terminus
    cl19252
    Location:214 → 251
    MreC; rod shape-determining protein MreC
    cl25732
    Location:298 → 538
    SMC_N; RecF/RecN/SMC N terminal domain

  26. XM_063810816.1 → XP_063666886.1  TNFAIP3-interacting protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A2I3RSQ5, A0A2J8NJQ1, A0A6D2XYE7

  27. XM_054684716.2 → XP_054540691.1  TNFAIP3-interacting protein 1 isoform X13

  28. XM_054684715.2 → XP_054540690.1  TNFAIP3-interacting protein 1 isoform X12

    UniProtKB/TrEMBL
    A0A2J8NJQ8, A0A6D2Y2Y7, H2QRT7

  29. XM_054684710.2 → XP_054540685.1  TNFAIP3-interacting protein 1 isoform X4

  30. XM_054684709.2 → XP_054540684.1  TNFAIP3-interacting protein 1 isoform X3

  31. XM_054684711.2 → XP_054540686.1  TNFAIP3-interacting protein 1 isoform X5

  32. XM_054684712.2 → XP_054540687.1  TNFAIP3-interacting protein 1 isoform X5

  33. XM_054684708.2 → XP_054540683.1  TNFAIP3-interacting protein 1 isoform X2

  34. XM_054684705.2 → XP_054540680.1  TNFAIP3-interacting protein 1 isoform X1

  35. XM_063810826.1 → XP_063666896.1  TNFAIP3-interacting protein 1 isoform X10

    UniProtKB/TrEMBL
    A0A2J8NJQ2

  36. XM_063810834.1 → XP_063666904.1  TNFAIP3-interacting protein 1 isoform X14

  37. XM_063810828.1 → XP_063666898.1  TNFAIP3-interacting protein 1 isoform X11

  38. XM_063810838.1 → XP_063666908.1  TNFAIP3-interacting protein 1 isoform X15

  39. XM_063810836.1 → XP_063666906.1  TNFAIP3-interacting protein 1 isoform X14

  40. XM_054684713.2 → XP_054540688.1  TNFAIP3-interacting protein 1 isoform X8

  41. XM_063810819.1 → XP_063666889.1  TNFAIP3-interacting protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A2J8NJR7

  42. XM_063810822.1 → XP_063666892.1  TNFAIP3-interacting protein 1 isoform X9

    UniProtKB/TrEMBL
    A0A2J8NJQ4, A0A803KLC0, K7CRT9

  43. XM_063810830.1 → XP_063666900.1  TNFAIP3-interacting protein 1 isoform X12

    UniProtKB/TrEMBL
    A0A2J8NJQ8, A0A6D2Y2Y7, H2QRT7

  44. XM_054684707.2 → XP_054540682.1  TNFAIP3-interacting protein 1 isoform X1

Nucleotide Protein
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