PDGFRB platelet derived growth factor receptor beta [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: PDGFRBprovided by VGNC
Official Full Name: platelet derived growth factor receptor betaprovided by VGNC
Primary source: VGNC:VGNC:57593
Locus tag: CK820_G0010082
See related: Ensembl:ENSPTRG00000044533
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 25

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	4	NC_072402.2 (147839864..147881866, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	5	NC_072403.1 (147852462..147894456, complement)

Chromosome 4 - NC_072402.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

RH69916 (e-PCR)
- UniSTS:6912

D5S2602 (e-PCR)
- UniSTS:56095

D5S2862 (e-PCR)
- UniSTS:38439

WI-18889 (e-PCR)
- UniSTS:44587

PDGFRB_1343 (e-PCR)
- UniSTS:277577

RH11092 (e-PCR)
- UniSTS:68426

WI-18300 (e-PCR)
- UniSTS:18664

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables platelet-derived growth factor beta-receptor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables platelet-derived growth factor binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in angiogenesis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in cell chemotaxis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in multicellular organism development	IEA Inferred from Electronic Annotation more info	PubMed
involved_in platelet-derived growth factor receptor signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed
involved_in positive regulation of kinase activity	IEA Inferred from Electronic Annotation more info	PubMed
involved_in positive regulation of smooth muscle cell migration	IEA Inferred from Electronic Annotation more info	PubMed
involved_in protein phosphorylation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
part_of receptor complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: platelet-derived growth factor receptor beta

Names: platelet-derived growth factor receptor, beta polypeptide

XP_016809517.2

EC 2.7.10.1

XP_016809519.2

EC 2.7.10.1

XP_016809520.2

EC 2.7.10.1

XP_024212544.2

EC 2.7.10.1

XP_054540672.1

EC 2.7.10.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

147839864..147881866 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_016954031.3 → XP_016809520.2 platelet-derived growth factor receptor beta isoform X2
XM_016954028.3 → XP_016809517.2 platelet-derived growth factor receptor beta isoform X1

UniProtKB/TrEMBL

K7BJP0
XM_016954030.3 → XP_016809519.2 platelet-derived growth factor receptor beta isoform X1

UniProtKB/TrEMBL

K7BJP0
XM_054684697.2 → XP_054540672.1 platelet-derived growth factor receptor beta isoform X1

UniProtKB/TrEMBL

K7BJP0
XM_024356776.3 → XP_024212544.2 platelet-derived growth factor receptor beta isoform X3