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Hmbs Hydroxymethylbilane synthase [ Drosophila melanogaster (fruit fly) ]

Gene ID: 46140, updated on 26-Apr-2024

Summary

Official Symbol
Hmbsprovided by FlyBase
Official Full Name
Hydroxymethylbilane synthaseprovided by FlyBase
Primary source
FLYBASE:FBgn0010786
Locus tag
Dmel_CG9165
See related
AllianceGenome:FB:FBgn0010786
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
2640; 3544; anon-WO0153538.70; CG9165; Dmel\CG9165; l(3)02640; l(3)3544; l(3)7E130; l(3)j4E3; Pbgd; PBGD
Summary
Predicted to enable hydroxymethylbilane synthase activity. Predicted to be involved in heme biosynthetic process. Predicted to be active in cytoplasm. Is expressed in several structures, including embryonic/larval central nervous system; embryonic/larval digestive system; eye disc; nephrocyte; and ring gland. Human ortholog(s) of this gene implicated in acute intermittent porphyria and sickle cell anemia. Orthologous to human HMBS (hydroxymethylbilane synthase). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
61F6-61F7; 3-0 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1334889..1339415)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1334889..1339415)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase (ubiquinone) acyl carrier protein Neighboring gene uncharacterized protein Neighboring gene mitotic spindle density 1 Neighboring gene mitotic spindle density 5 Neighboring gene indra Neighboring gene Protein tyrosine phosphatase 61F Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables hydroxymethylbilane synthase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables hydroxymethylbilane synthase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydroxymethylbilane synthase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in heme biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in heme biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in tetrapyrrole biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
hydroxymethylbilane synthase
Names
CG9165-PA
Hmbs-PA
lethal (3) 02640
porphobilinogen deaminase
NP_612103.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    1334889..1339415
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_138259.3NP_612103.1  hydroxymethylbilane synthase [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_612103.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IH53, Q9W0G4
    Related
    FBpp0072572
    Conserved Domains (2) summary
    PRK00072
    Location:6289
    hemC; porphobilinogen deaminase; Reviewed
    cd13645
    Location:7296
    PBP2_HuPBGD_like; Human porphobilinogen deaminase possess type 2 periplasmic binding protein fold