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PLSCR1 phospholipid scramblase 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 460757, updated on 3-Apr-2024

Summary

Official Symbol
PLSCR1provided by VGNC
Official Full Name
phospholipid scramblase 1provided by VGNC
Primary source
VGNC:VGNC:12125
Locus tag
CK820_G0006429
See related
Ensembl:ENSPTRG00000015499
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (149703029..149732806, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (149612400..149642172, complement)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene phospholipid scramblase 2 Neighboring gene uncharacterized LOC129143540 Neighboring gene U6 spliceosomal RNA Neighboring gene phospholipid scramblase family member 5

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid scramblase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in plasma membrane phospholipid scrambling IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
phospholipid scramblase 2; phospholipid scramblase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    149703029..149732806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001135229.8XP_001135229.2  phospholipid scramblase 1 isoform X1

    See identical proteins and their annotated locations for XP_001135229.2

    UniProtKB/TrEMBL
    A0A2I3TJC3, A0A2J8P2X7, A0A6D2WMY2, H2R7Z9
    Related
    ENSPTRP00000051012.2
    Conserved Domains (2) summary
    pfam03803
    Location:86307
    Scramblase; Scramblase
    cl27975
    Location:2297
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)
  2. XM_063807265.1XP_063663335.1  phospholipid scramblase 1 isoform X3

    UniProtKB/TrEMBL
    A0A2I3TB46, A0A2J8P305, A0A6D2XDT0
  3. XM_009446645.5XP_009444920.1  phospholipid scramblase 1 isoform X2

    See identical proteins and their annotated locations for XP_009444920.1

    UniProtKB/TrEMBL
    A0A2I3TJC3, A0A2J8P2Y9
    Conserved Domains (2) summary
    pfam03803
    Location:79300
    Scramblase; Scramblase
    cl27975
    Location:1590
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)
  4. XM_054681155.2XP_054537130.1  phospholipid scramblase 1 isoform X3

    UniProtKB/TrEMBL
    A0A2I3TB46, A0A2J8P305, A0A6D2XDT0