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KLF7 KLF transcription factor 7 [ Pan troglodytes (chimpanzee) ]

Gene ID: 459900, updated on 3-Apr-2024

Summary

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Official Symbol
KLF7provided by VGNC
Official Full Name
KLF transcription factor 7provided by VGNC
Primary source
VGNC:VGNC:14148
Locus tag
CK820_G0014959
See related
Ensembl:ENSPTRG00000012850
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See KLF7 in Genome Data Viewer
Location:
chromosome: 2B
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 13 NC_072411.2 (109304543..109403325, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2B NC_072400.1 (109214732..109314477, complement)

Chromosome 13 - NC_072411.2Genomic Context describing neighboring genes Neighboring gene malate dehydrogenase 1B Neighboring gene FAST kinase domains 2 Neighboring gene carboxypeptidase O Neighboring gene uncharacterized LOC134808001 Neighboring gene spidroin-2-like Neighboring gene microRNA mir-2355 Neighboring gene uncharacterized LOC134808002 Neighboring gene cAMP responsive element binding protein 1 Neighboring gene methyltransferase 21A, HSPA lysine

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 7
Names
Kruppel like factor 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072411.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    109304543..109403325 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054679242.2 → XP_054535217.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A2I3RAR5, A0A2J8N5T0, A0A6D2XGD5

  2. XM_063790684.1 → XP_063646754.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A2I3RAR5, A0A2J8N5T0, A0A6D2XGD5

  3. XM_054679243.2 → XP_054535218.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A2I3RAR5, A0A2J8N5T0, A0A6D2XGD5

  4. XM_054679241.2 → XP_054535216.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A2I3RAR5, A0A2J8N5T0, A0A6D2XGD5

  5. XM_054679239.2 → XP_054535214.1  Krueppel-like factor 7 isoform X1

  6. XM_016950374.3 → XP_016805863.1  Krueppel-like factor 7 isoform X1

    Conserved Domains (5) summary
    COG5048
    Location:224 → 282
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:280 → 302
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:266 → 291
    zf-H2C2_2; Zinc-finger double domain
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  7. XM_016950372.4 → XP_016805861.1  Krueppel-like factor 7 isoform X1

    Conserved Domains (5) summary
    COG5048
    Location:224 → 282
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:280 → 302
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:266 → 291
    zf-H2C2_2; Zinc-finger double domain
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

RNA

  1. XR_010149847.1 RNA Sequence

  2. XR_010149846.1 RNA Sequence

Nucleotide Protein
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