HAT1 histone acetyltransferase 1 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: HAT1provided by VGNC
Official Full Name: histone acetyltransferase 1provided by VGNC
Primary source: VGNC:VGNC:1956
Locus tag: CK820_G0001477
See related: Ensembl:ENSPTRG00000012637
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2B

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	13	NC_072411.2 (73972788..74042881)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	2B	NC_072400.1 (73972753..74042841)

Chromosome 13 - NC_072411.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

A002M36 (e-PCR)
- UniSTS:1350

MARC_12189-12190:1004712897:1 (e-PCR)
- UniSTS:267358

MARC_12189-12190:1007747014:1 (e-PCR)
- UniSTS:267358

D2S1585E (e-PCR)
- UniSTS:150669

HAT1_3911 (e-PCR)
- UniSTS:462235

SHGC-36760 (e-PCR)
- UniSTS:17570

RH46263 (e-PCR)
- UniSTS:4074

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables histone H4 acetyltransferase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables histone binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in subtelomeric heterochromatin formation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: histone acetyltransferase type B catalytic subunit

XP_001146318.3

EC 2.3.1.48

XP_009442035.1

EC 2.3.1.48

XP_063646657.1

EC 2.3.1.48

XP_063646658.1

EC 2.3.1.48

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072411.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

73972788..74042881

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_001146318.6 → XP_001146318.3 histone acetyltransferase type B catalytic subunit isoform X1

UniProtKB/TrEMBL

A0A2I3SEA1

Related

ENSPTRP00000021597.3

Conserved Domains (1) summary

pfam10394
Location:53 → 215

Hat1_N; Histone acetyl transferase HAT1 N-terminus
XM_063790588.1 → XP_063646658.1 histone acetyltransferase type B catalytic subunit isoform X2

UniProtKB/TrEMBL

A0A2I3TLU7
XM_009443760.5 → XP_009442035.1 histone acetyltransferase type B catalytic subunit isoform X2

See identical proteins and their annotated locations for XP_009442035.1

UniProtKB/TrEMBL

A0A2I3SEA1, A0A2I3TLU7

Related

ENSPTRP00000075318.1

Conserved Domains (1) summary

pfam10394
Location:19 → 181

Hat1_N; Histone acetyl transferase HAT1 N-terminus
XM_063790587.1 → XP_063646657.1 histone acetyltransferase type B catalytic subunit isoform X2

UniProtKB/TrEMBL

A0A2I3TLU7