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CALM2 calmodulin 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 459213, updated on 29-Mar-2024

Summary

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Gene symbol
CALM2
Gene description
calmodulin 2
Locus tag
CK820_G0028057
See related
Ensembl:ENSPTRG00000011901
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (75515038..75531176)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (47322059..47338197, complement)

Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104004968 Neighboring gene epithelial cell adhesion molecule Neighboring gene microRNA mir-559 Neighboring gene uncharacterized LOC107973457 Neighboring gene uncharacterized LOC129143120 Neighboring gene sperm-tail PG-rich repeat containing 4 Neighboring gene tetratricopeptide repeat domain 7A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping of chimpanzee full-length cDNAs onto the human genome unveils large potential divergence of the transcriptome. Sakate R, et al. Gene, 2007 Sep 1. PMID 17574350

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables enzyme regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calmodulin-2
NP_001092028.1
XP_016798698.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001098558.1 → NP_001092028.1  calmodulin-2

    See identical proteins and their annotated locations for NP_001092028.1

    Status: PROVISIONAL

    Source sequence(s)
    AB222140
    UniProtKB/TrEMBL
    A0A2J8K1E0, A0A6D2Y8X2, A5A6L2, H2QHV8
    Related
    ENSPTRP00000020427.5, ENSPTRT00000022140.6
    Conserved Domains (1) summary
    PTZ00184
    Location:1 → 149
    PTZ00184; calmodulin; Provisional

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    75515038..75531176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016943209.3 → XP_016798698.1  calmodulin-2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8LLD7
    Conserved Domains (1) summary
    PTZ00184
    Location:50 → 197
    PTZ00184; calmodulin; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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