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PRKD3 protein kinase D3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 459158, updated on 3-Apr-2024

Summary

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Official Symbol
PRKD3provided by VGNC
Official Full Name
protein kinase D3provided by VGNC
Primary source
VGNC:VGNC:342
Locus tag
CK820_G0033690
See related
Ensembl:ENSPTRG00000011838
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2A
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (85472033..85546185)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (37307051..37381191, complement)

Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene glutaminyl-peptide cyclotransferase Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC134807822 Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 7 Neighboring gene CCAAT enhancer binding protein zeta Neighboring gene CEBPZ opposite strand Neighboring gene large ribosomal subunit protein eL31-like Neighboring gene sulfotransferase family 6B member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase D3
XP_009440575.1
XP_016803851.1
XP_016803852.1
XP_063645203.1
XP_063645204.1
XP_063645205.1
XP_063645206.1
XP_063645207.1
XP_063645208.1
XP_063645209.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    85472033..85546185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063789133.1 → XP_063645203.1  serine/threonine-protein kinase D3 isoform X1

    UniProtKB/TrEMBL
    A0A2J8L2B0, A0A6D2XEW9, H2QHR7

  2. XM_063789135.1 → XP_063645205.1  serine/threonine-protein kinase D3 isoform X3

  3. XM_009442300.5 → XP_009440575.1  serine/threonine-protein kinase D3 isoform X4

    See identical proteins and their annotated locations for XP_009440575.1

    UniProtKB/TrEMBL
    A0A2I3TGR1
    Conserved Domains (5) summary
    smart00220
    Location:476 → 728
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd00029
    Location:168 → 217
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01239
    Location:306 → 430
    PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
    cd14082
    Location:468 → 727
    STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D
    pfam00130
    Location:55 → 100
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)

  4. XM_063789134.1 → XP_063645204.1  serine/threonine-protein kinase D3 isoform X2

  5. XM_063789136.1 → XP_063645206.1  serine/threonine-protein kinase D3 isoform X5

  6. XM_063789137.1 → XP_063645207.1  serine/threonine-protein kinase D3 isoform X5

  7. XM_016948363.4 → XP_016803852.1  serine/threonine-protein kinase D3 isoform X1

    UniProtKB/TrEMBL
    A0A2I3TGR1, A0A2J8L2B0, A0A6D2XEW9, H2QHR7
    Conserved Domains (4) summary
    cd01239
    Location:410 → 534
    PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
    cd14082
    Location:572 → 831
    STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D
    cd20841
    Location:145 → 219
    C1_PKD3_rpt1; first protein kinase C conserved region 1 (C1 domain) found in protein kinase D3 (PKD3) and similar proteins
    cd20844
    Location:267 → 335
    C1_PKD3_rpt2; second protein kinase C conserved region 1 (C1 domain) found in protein kinase D3 (PKD3) and similar proteins

  8. XM_063789139.1 → XP_063645209.1  serine/threonine-protein kinase D3 isoform X5

  9. XM_016948362.4 → XP_016803851.1  serine/threonine-protein kinase D3 isoform X1

    UniProtKB/TrEMBL
    A0A2I3TGR1, A0A2J8L2B0, A0A6D2XEW9, H2QHR7
    Related
    ENSPTRP00000020330.3
    Conserved Domains (4) summary
    cd01239
    Location:410 → 534
    PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
    cd14082
    Location:572 → 831
    STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D
    cd20841
    Location:145 → 219
    C1_PKD3_rpt1; first protein kinase C conserved region 1 (C1 domain) found in protein kinase D3 (PKD3) and similar proteins
    cd20844
    Location:267 → 335
    C1_PKD3_rpt2; second protein kinase C conserved region 1 (C1 domain) found in protein kinase D3 (PKD3) and similar proteins

  10. XM_063789138.1 → XP_063645208.1  serine/threonine-protein kinase D3 isoform X5

Nucleotide Protein
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