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LPIN1 lipin 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 459036, updated on 3-Apr-2024

Summary

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Official Symbol
LPIN1provided by VGNC
Official Full Name
lipin 1provided by VGNC
Primary source
VGNC:VGNC:291
Locus tag
CK820_G0009766
See related
Ensembl:ENSPTRG00000011665
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See LPIN1 in Genome Data Viewer
Location:
chromosome: 2A
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (111047364..111198125, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (11655112..11805874)

Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101057707 Neighboring gene small nucleolar RNA SNORD18 Neighboring gene hsc70-interacting protein-like Neighboring gene uncharacterized LOC104004881 Neighboring gene neurotensin receptor 2 Neighboring gene growth regulating estrogen receptor binding 1 Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN1
XP_001160223.2
XP_001160716.1
XP_009440285.1
XP_009440292.1
XP_009440293.1
XP_024209971.1
XP_024209972.1
XP_024209975.1
XP_024209976.1
XP_024209977.1
XP_054534236.1
XP_054534237.1
XP_054534238.1
XP_054534239.1
XP_054534240.1
XP_054534241.1
XP_054534242.1
XP_054534243.1
XP_054534244.1
XP_054534245.1
XP_063645358.1
XP_063645359.1
XP_063645360.1
XP_063645361.1
XP_063645362.1
XP_063645363.1
XP_063645364.1
XP_063645365.1
XP_063645366.1
XP_063645367.1
XP_063645368.1
XP_063645369.1
XP_063645370.1
XP_063645371.1
XP_063645372.1
XP_063645373.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    111047364..111198125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063789289.1 → XP_063645359.1  phosphatidate phosphatase LPIN1 isoform X7

  2. XM_009442017.5 → XP_009440292.1  phosphatidate phosphatase LPIN1 isoform X10

    UniProtKB/TrEMBL
    A0A2J8NLT0
    Conserved Domains (4) summary
    pfam15017
    Location:904 → 933
    AF1Q; Drug resistance and apoptosis regulator
    pfam04571
    Location:50 → 155
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:675 → 900
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:513 → 603
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  3. XM_001160223.7 → XP_001160223.2  phosphatidate phosphatase LPIN1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3S931, A0A2J8NLS3, A0A2J8NLT0, A0A6D2WIY7
    Related
    ENSPTRP00000073555.1
    Conserved Domains (3) summary
    pfam04571
    Location:50 → 156
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:711 → 936
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:549 → 639
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  4. XM_054678263.2 → XP_054534238.1  phosphatidate phosphatase LPIN1 isoform X9

  5. XM_054678267.2 → XP_054534242.1  phosphatidate phosphatase LPIN1 isoform X16

  6. XM_054678261.2 → XP_054534236.1  phosphatidate phosphatase LPIN1 isoform X2

  7. XM_054678266.2 → XP_054534241.1  phosphatidate phosphatase LPIN1 isoform X15

  8. XM_009442010.5 → XP_009440285.1  phosphatidate phosphatase LPIN1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8NLT0
    Conserved Domains (4) summary
    pfam15017
    Location:966 → 995
    AF1Q; Drug resistance and apoptosis regulator
    pfam04571
    Location:50 → 155
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:737 → 962
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:549 → 665
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  9. XM_063789288.1 → XP_063645358.1  phosphatidate phosphatase LPIN1 isoform X3

  10. XM_024354204.3 → XP_024209972.1  phosphatidate phosphatase LPIN1 isoform X6

    UniProtKB/TrEMBL
    A0A2J8NLT0
    Conserved Domains (3) summary
    pfam04571
    Location:50 → 156
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:701 → 926
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:513 → 629
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  11. XM_024354203.3 → XP_024209971.1  phosphatidate phosphatase LPIN1 isoform X5

    UniProtKB/TrEMBL
    A0A2J8NLT0
    Conserved Domains (3) summary
    pfam04571
    Location:50 → 156
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:710 → 935
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:548 → 638
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  12. XM_054678270.2 → XP_054534245.1  phosphatidate phosphatase LPIN1 isoform X23

  13. XM_009442018.5 → XP_009440293.1  phosphatidate phosphatase LPIN1 isoform X18

    UniProtKB/TrEMBL
    A0A2I3TX62, A0A2J8NLT0, A0A2J8NLT7, A0A6D2VXZ5
    Related
    ENSPTRP00000093768.1
    Conserved Domains (3) summary
    pfam04571
    Location:7 → 113
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:632 → 857
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:470 → 560
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  14. XM_054678269.2 → XP_054534244.1  phosphatidate phosphatase LPIN1 isoform X21

  15. XM_054678265.2 → XP_054534240.1  phosphatidate phosphatase LPIN1 isoform X12

  16. XM_054678268.2 → XP_054534243.1  phosphatidate phosphatase LPIN1 isoform X20

    UniProtKB/TrEMBL
    A0A2I3S3X5

  17. XM_054678264.2 → XP_054534239.1  phosphatidate phosphatase LPIN1 isoform X11

    UniProtKB/TrEMBL
    A0A2J8NLS9

  18. XM_063789296.1 → XP_063645366.1  phosphatidate phosphatase LPIN1 isoform X19

    UniProtKB/TrEMBL
    A0A2J8NLU3

  19. XM_063789291.1 → XP_063645361.1  phosphatidate phosphatase LPIN1 isoform X13

  20. XM_063789303.1 → XP_063645373.1  phosphatidate phosphatase LPIN1 isoform X24

  21. XM_063789294.1 → XP_063645364.1  phosphatidate phosphatase LPIN1 isoform X14

  22. XM_063789300.1 → XP_063645370.1  phosphatidate phosphatase LPIN1 isoform X22

  23. XM_063789298.1 → XP_063645368.1  phosphatidate phosphatase LPIN1 isoform X19

    UniProtKB/TrEMBL
    A0A2J8NLU3

  24. XM_063789295.1 → XP_063645365.1  phosphatidate phosphatase LPIN1 isoform X14

  25. XM_063789292.1 → XP_063645362.1  phosphatidate phosphatase LPIN1 isoform X13

  26. XM_063789290.1 → XP_063645360.1  phosphatidate phosphatase LPIN1 isoform X8

  27. XM_063789302.1 → XP_063645372.1  phosphatidate phosphatase LPIN1 isoform X24

  28. XM_001160716.6 → XP_001160716.1  phosphatidate phosphatase LPIN1 isoform X19

    UniProtKB/TrEMBL
    A0A2J8NLT0, A0A2J8NLU3
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:626 → 851
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:464 → 554
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  29. XM_024354209.2 → XP_024209977.1  phosphatidate phosphatase LPIN1 isoform X17

    UniProtKB/TrEMBL
    A0A2J8NLT0
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:652 → 877
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:464 → 580
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  30. XM_024354208.2 → XP_024209976.1  phosphatidate phosphatase LPIN1 isoform X14

    UniProtKB/TrEMBL
    A0A2J8NLT0
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:661 → 886
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:499 → 589
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  31. XM_024354207.2 → XP_024209975.1  phosphatidate phosphatase LPIN1 isoform X13

    UniProtKB/TrEMBL
    A0A2J8NLT0
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:662 → 887
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:500 → 590
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  32. XM_054678262.1 → XP_054534237.1  phosphatidate phosphatase LPIN1 isoform X8

  33. XM_063789297.1 → XP_063645367.1  phosphatidate phosphatase LPIN1 isoform X19

    UniProtKB/TrEMBL
    A0A2J8NLU3

  34. XM_063789301.1 → XP_063645371.1  phosphatidate phosphatase LPIN1 isoform X8

  35. XM_063789299.1 → XP_063645369.1  phosphatidate phosphatase LPIN1 isoform X19

    UniProtKB/TrEMBL
    A0A2J8NLU3

  36. XM_063789293.1 → XP_063645363.1  phosphatidate phosphatase LPIN1 isoform X13

Nucleotide Protein
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