KLF11 KLF transcription factor 11 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: KLF11provided by VGNC
Official Full Name: KLF transcription factor 11provided by VGNC
Primary source: VGNC:VGNC:48967
Locus tag: CK820_G0009822
See related: Ensembl:ENSPTRG00000011645
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2A

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	12	NC_072410.2 (112817295..112828589, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	2A	NC_072399.1 (10024674..10035945)

Chromosome 12 - NC_072410.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

NoName (e-PCR)
- UniSTS:480520

SHGC-33613 (e-PCR)
- UniSTS:74016

NoName (e-PCR)
- UniSTS:482122

SHGC-36737 (e-PCR)
- UniSTS:11113

RH78629 (e-PCR)
- UniSTS:80550

RH11597 (e-PCR)
- UniSTS:10463

TIEG2_8811 (e-PCR)
- UniSTS:467937

G20404 (e-PCR)
- UniSTS:22253

A005P43 (e-PCR)
- UniSTS:22254

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: Krueppel-like factor 11

Names: Kruppel like factor 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

112817295..112828589 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_016946973.3 → XP_016802462.1 Krueppel-like factor 11 isoform X1

UniProtKB/TrEMBL

A0A2J8NM00, A0A6D2X7I9, H2QHF4

Related

ENSPTRP00000020024.3

Conserved Domains (4) summary

COG5048
Location:393 → 449

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:399 → 418

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam00096
Location:454 → 476

zf-C2H2; Zinc finger, C2H2 type

pfam13465
Location:440 → 463

zf-H2C2_2; Zinc-finger double domain
XM_054678239.2 → XP_054534214.1 Krueppel-like factor 11 isoform X2

UniProtKB/TrEMBL

A0A2I3TTI9, A0A2J8NM01, A0A6D2WZ95
XM_063789321.1 → XP_063645391.1 Krueppel-like factor 11 isoform X2

UniProtKB/TrEMBL

A0A2I3TTI9, A0A2J8NM01, A0A6D2WZ95
XM_009441995.5 → XP_009440270.1 Krueppel-like factor 11 isoform X2

See identical proteins and their annotated locations for XP_009440270.1

UniProtKB/TrEMBL

A0A2I3TTI9, A0A2J8NM01, A0A6D2WZ95

Related

ENSPTRP00000092296.1

Conserved Domains (4) summary

COG5048
Location:376 → 432

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:382 → 401

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam00096
Location:437 → 459

zf-C2H2; Zinc finger, C2H2 type

pfam13465
Location:423 → 446

zf-H2C2_2; Zinc-finger double domain
XM_063789319.1 → XP_063645389.1 Krueppel-like factor 11 isoform X2

UniProtKB/TrEMBL

A0A2I3TTI9, A0A2J8NM01, A0A6D2WZ95
XM_063789320.1 → XP_063645390.1 Krueppel-like factor 11 isoform X2

UniProtKB/TrEMBL

A0A2I3TTI9, A0A2J8NM01, A0A6D2WZ95