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EFCAB6 EF-hand calcium binding domain 6 [ Pan troglodytes (chimpanzee) ]

Gene ID: 458892, updated on 29-Mar-2024

Summary

Official Symbol
EFCAB6provided by VGNC
Official Full Name
EF-hand calcium binding domain 6provided by VGNC
Primary source
VGNC:VGNC:5256
Locus tag
CK820_G0027444
See related
Ensembl:ENSPTRG00000014475
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

Location:
chromosome: 22
Exon count:
35
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 23 NC_086016.1 (45525422..45808661, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 22 NC_072420.1 (38557816..38841062, complement)

Chromosome 23 - NC_086016.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134809676 Neighboring gene metallophosphoesterase domain containing 1 Neighboring gene uncharacterized LOC129138521 Neighboring gene uncharacterized LOC107970264 Neighboring gene sulfotransferase family 4A member 1 Neighboring gene patatin like phospholipase domain containing 5

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
EF-hand calcium-binding domain-containing protein 6
Names
CAP-binding protein complex interacting protein 1
DJ-1-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086016.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    45525422..45808661 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016939334.4XP_016794823.3  EF-hand calcium-binding domain-containing protein 6 isoform X1

  2. XM_054675929.2XP_054531904.1  EF-hand calcium-binding domain-containing protein 6 isoform X2

  3. XM_016939337.4XP_016794826.3  EF-hand calcium-binding domain-containing protein 6 isoform X3

  4. XM_016939338.4XP_016794827.3  EF-hand calcium-binding domain-containing protein 6 isoform X3

  5. XM_063807695.1XP_063663765.1  EF-hand calcium-binding domain-containing protein 6 isoform X2

  6. XM_016939335.4XP_016794824.3  EF-hand calcium-binding domain-containing protein 6 isoform X1

  7. XM_054675930.2XP_054531905.1  EF-hand calcium-binding domain-containing protein 6 isoform X5

  8. XM_063807697.1XP_063663767.1  EF-hand calcium-binding domain-containing protein 6 isoform X4

  9. XM_063807696.1XP_063663766.1  EF-hand calcium-binding domain-containing protein 6 isoform X4

  10. XM_016939340.4XP_016794829.3  EF-hand calcium-binding domain-containing protein 6 isoform X4

  11. XM_054675933.2XP_054531908.1  EF-hand calcium-binding domain-containing protein 6 isoform X6

RNA

  1. XR_010155956.1 RNA Sequence

  2. XR_010155963.1 RNA Sequence

  3. XR_010155962.1 RNA Sequence

  4. XR_010155961.1 RNA Sequence

  5. XR_010155958.1 RNA Sequence

  6. XR_010155955.1 RNA Sequence

  7. XR_010155957.1 RNA Sequence

  8. XR_010155960.1 RNA Sequence

  9. XR_010155959.1 RNA Sequence

  10. XR_010155964.1 RNA Sequence