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NR1I3 nuclear receptor subfamily 1 group I member 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 458014, updated on 3-Apr-2024

Summary

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Official Symbol
NR1I3provided by VGNC
Official Full Name
nuclear receptor subfamily 1 group I member 3provided by VGNC
Primary source
VGNC:VGNC:6922
Locus tag
CK820_G0049351
See related
Ensembl:ENSPTRG00000001582
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
CAR
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (87980922..87989379)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (143360353..143368867, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene myelin protein zero Neighboring gene Purkinje cell protein 4 like 1 Neighboring gene uncharacterized LOC129138010 Neighboring gene translocase of outer mitochondrial membrane 40 like Neighboring gene apolipoprotein A2 Neighboring gene Fc epsilon receptor Ig

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An empirical test for branch-specific positive selection. Nickel GC, et al. Genetics, 2008 Aug. PMID 18689901, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor subfamily 1 group I member 3
Names
constitutive androstane receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135615.1 → NP_001129087.1  nuclear receptor subfamily 1 group I member 3

    See identical proteins and their annotated locations for NP_001129087.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ977427
    UniProtKB/Swiss-Prot
    A2T7D9
    UniProtKB/TrEMBL
    H2Q0G6
    Related
    ENSPTRP00000002647.6, ENSPTRT00000002884.6
    Conserved Domains (2) summary
    cd06934
    Location:106 → 346
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cd07156
    Location:11 → 82
    NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    87980922..87989379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009433817.5 → XP_009432092.1  nuclear receptor subfamily 1 group I member 3 isoform X1

    UniProtKB/TrEMBL
    A0A2I3SG59, A0A2J8JAS3, A0A6D2VUM5, H2Q0G6
    Related
    ENSPTRP00000075465.1
    Conserved Domains (2) summary
    cd06934
    Location:106 → 355
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cd07156
    Location:11 → 82
    NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers

  2. XM_009433823.5 → XP_009432098.1  nuclear receptor subfamily 1 group I member 3 isoform X3

    UniProtKB/TrEMBL
    A0A2J8JAU0, H2Q0G6
    Conserved Domains (2) summary
    cd06934
    Location:106 → 350
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cd07156
    Location:11 → 82
    NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers

  3. XM_063793971.1 → XP_063650041.1  nuclear receptor subfamily 1 group I member 3 isoform X12

    UniProtKB/TrEMBL
    A0A2J8JAS9

  4. XM_009433818.5 → XP_009432093.1  nuclear receptor subfamily 1 group I member 3 isoform X2

    UniProtKB/TrEMBL
    H2Q0G6
    Related
    ENSPTRP00000081589.1
    Conserved Domains (2) summary
    cd06934
    Location:106 → 351
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cd07156
    Location:11 → 82
    NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers

  5. XM_063793966.1 → XP_063650036.1  nuclear receptor subfamily 1 group I member 3 isoform X11

    UniProtKB/TrEMBL
    A0A2J8JAT4

  6. XM_009433829.5 → XP_009432104.1  nuclear receptor subfamily 1 group I member 3 isoform X4

    UniProtKB/TrEMBL
    A0A2J8JAT1, H2Q0G6
    Conserved Domains (2) summary
    cd06934
    Location:106 → 346
    NR_LBD_PXR_like; The ligand binding domain of xenobiotic receptors:pregnane X receptor and constitutive androstane receptor
    cd07156
    Location:11 → 82
    NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers

  7. XM_016924270.4 → XP_016779759.1  nuclear receptor subfamily 1 group I member 3 isoform X8

    UniProtKB/TrEMBL
    A0A2I3RIF5, A0A2J8JAU8, A0A6D2XL66, H2Q0G6
    Related
    ENSPTRP00000064153.1
    Conserved Domains (2) summary
    cd07156
    Location:11 → 82
    NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers
    cl11397
    Location:106 → 312
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

  8. XM_009433830.5 → XP_009432105.1  nuclear receptor subfamily 1 group I member 3 isoform X9

    UniProtKB/TrEMBL
    A0A2J8JAU4, H2Q0G6
    Conserved Domains (2) summary
    cd07156
    Location:11 → 82
    NR_DBD_VDR_like; The DNA-binding domain of vitamin D receptors (VDR) like nuclear receptor family is composed of two C4-type zinc fingers
    cl11397
    Location:106 → 307
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

  9. XM_063794058.1 → XP_063650128.1  nuclear receptor subfamily 1 group I member 3 isoform X16

    UniProtKB/TrEMBL
    A0A2J8JAS6

  10. XM_009433797.5 → XP_009432072.3  nuclear receptor subfamily 1 group I member 3 isoform X5

  11. XM_009433833.5 → XP_009432108.3  nuclear receptor subfamily 1 group I member 3 isoform X13

    UniProtKB/TrEMBL
    A0A2J8JAS5

  12. XM_009433802.5 → XP_009432077.3  nuclear receptor subfamily 1 group I member 3 isoform X6

    UniProtKB/TrEMBL
    A0A2I3SX59, A0A2J8JAU3, A0A6D2X2Z7

  13. XM_009433837.5 → XP_009432112.3  nuclear receptor subfamily 1 group I member 3 isoform X14

    UniProtKB/TrEMBL
    A0A2J8JAS8

  14. XM_009433808.5 → XP_009432083.3  nuclear receptor subfamily 1 group I member 3 isoform X7

    UniProtKB/TrEMBL
    A0A2J8JAT5

  15. XM_063794034.1 → XP_063650104.1  nuclear receptor subfamily 1 group I member 3 isoform X15

    UniProtKB/TrEMBL
    A0A2J8JAU2

  16. XM_009433813.5 → XP_009432088.3  nuclear receptor subfamily 1 group I member 3 isoform X10

    UniProtKB/TrEMBL
    A0A2J8JAT9

  17. XM_009433844.5 → XP_009432119.3  nuclear receptor subfamily 1 group I member 3 isoform X17

    UniProtKB/TrEMBL
    A0A2J8JAR7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A2T7D9.1 GenPept UniProtKB/Swiss-Prot:A2T7D9

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