U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PPP2R5A protein phosphatase 2 regulatory subunit B'alpha [ Pan troglodytes (chimpanzee) ]

Gene ID: 457716, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
PPP2R5Aprovided by VGNC
Official Full Name
protein phosphatase 2 regulatory subunit B'alphaprovided by VGNC
Primary source
VGNC:VGNC:10426
Locus tag
CK820_G0012686
See related
Ensembl:ENSPTRG00000001958
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PPP2R5A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (36756558..36829118, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (194494251..194566792)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107970100 Neighboring gene proton activated chloride channel 1 Neighboring gene small nucleolar RNA SNORA16B/SNORA16A family Neighboring gene large ribosomal subunit protein uL23-like Neighboring gene uncharacterized LOC107970095 Neighboring gene uncharacterized LOC104004711

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein phosphatase type 2A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001302436.1 → NP_001289365.1  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform

    See identical proteins and their annotated locations for NP_001289365.1

    Status: PROVISIONAL

    Source sequence(s)
    AK305130
    UniProtKB/TrEMBL
    G2HEG6, H2Q137
    Related
    ENSPTRP00000086516.1, ENSPTRT00000091469.1
    Conserved Domains (3) summary
    PLN00122
    Location:294 → 383
    PLN00122; serine/threonine protein phosphatase 2A; Provisional
    pfam01603
    Location:7 → 385
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)
    cl14852
    Location:86 → 178
    WYL; WYL domain

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    36756558..36829118 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016921055.4 → XP_016776544.1  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X1

    UniProtKB/TrEMBL
    A0A2J8QVF1, A0A6D2WT26, H2Q137, K7CXU1
    Related
    ENSPTRP00000079578.1
    Conserved Domains (1) summary
    pfam01603
    Location:64 → 442
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)

  2. XM_016921101.4 → XP_016776590.1  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X3

    UniProtKB/TrEMBL
    H2Q137

  3. XM_054660603.2 → XP_054516578.1  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.