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PPOX protoporphyrinogen oxidase [ Pan troglodytes (chimpanzee) ]

Gene ID: 457450, updated on 3-Apr-2024

Summary

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Official Symbol
PPOXprovided by VGNC
Official Full Name
protoporphyrinogen oxidaseprovided by VGNC
Primary source
VGNC:VGNC:1465
Locus tag
CK820_G0049343
See related
Ensembl:ENSPTRG00000001574
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (88041020..88053020, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (143296524..143308712)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene Fc epsilon receptor Ig Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 4 Neighboring gene beta-1,4-galactosyltransferase 3 Neighboring gene ubiquitin specific peptidase 21 Neighboring gene ubiquitin-fold modifier conjugating enzyme 1 Neighboring gene small nucleolar RNA ACA64

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxygen-dependent protoporphyrinogen oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in porphyrin-containing compound biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protoporphyrinogen oxidase
XP_016786276.1
XP_016786282.1
XP_024205257.1
XP_054528819.1
XP_054528820.1
XP_054528823.1
XP_054528829.1
XP_063667883.1
XP_063667886.1
XP_063667887.1
XP_063667888.1
XP_063667889.1
XP_063667890.1
XP_063667891.1
XP_063667892.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    88041020..88053020 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054672854.2 → XP_054528829.1  protoporphyrinogen oxidase isoform X5

  2. XM_054672848.2 → XP_054528823.1  protoporphyrinogen oxidase isoform X4

  3. XM_016930787.3 → XP_016786276.1  protoporphyrinogen oxidase isoform X1

  4. XM_054672844.2 → XP_054528819.1  protoporphyrinogen oxidase isoform X3

  5. XM_063811813.1 → XP_063667883.1  protoporphyrinogen oxidase isoform X3

  6. XM_054672845.1 → XP_054528820.1  protoporphyrinogen oxidase isoform X3

  7. XM_063811819.1 → XP_063667889.1  protoporphyrinogen oxidase isoform X7

  8. XM_016930793.3 → XP_016786282.1  protoporphyrinogen oxidase isoform X2

    UniProtKB/TrEMBL
    H2Q0G1

  9. XM_063811817.1 → XP_063667887.1  protoporphyrinogen oxidase isoform X6

    UniProtKB/TrEMBL
    A0A2I3SYH2, A0A2J8JAP0, A0A6D2WAX9

  10. XM_063811816.1 → XP_063667886.1  protoporphyrinogen oxidase isoform X6

    UniProtKB/TrEMBL
    A0A2I3SYH2, A0A2J8JAP0, A0A6D2WAX9

  11. XM_024349489.3 → XP_024205257.1  protoporphyrinogen oxidase isoform X7

    Conserved Domains (1) summary
    TIGR00562
    Location:30 → 335
    proto_IX_ox; protoporphyrinogen oxidase

  12. XM_063811822.1 → XP_063667892.1  protoporphyrinogen oxidase isoform X8

  13. XM_063811820.1 → XP_063667890.1  protoporphyrinogen oxidase isoform X7

  14. XM_063811821.1 → XP_063667891.1  protoporphyrinogen oxidase isoform X8

  15. XM_063811818.1 → XP_063667888.1  protoporphyrinogen oxidase isoform X6

    UniProtKB/TrEMBL
    A0A2I3SYH2, A0A2J8JAP0, A0A6D2WAX9
Nucleotide Protein
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