U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

IFI16 interferon gamma inducible protein 16 [ Pan troglodytes (chimpanzee) ]

Gene ID: 457424, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
IFI16provided by VGNC
Official Full Name
interferon gamma inducible protein 16provided by VGNC
Primary source
VGNC:VGNC:8913
Locus tag
CK820_G0041406
See related
Ensembl:ENSPTRG00000001518
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (90149222..90200080, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (141149652..141200510)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene absent in melanoma 2 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene cell cycle checkpoint protein RAD1-like Neighboring gene pyrin domain containing 5 Neighboring gene pyrin and HIN domain family member 1 Neighboring gene myeloid cell nuclear differentiation antigen

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to interferon-beta IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
gamma-interferon-inducible protein 16

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    90149222..90200080 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054687371.1 → XP_054543346.1  gamma-interferon-inducible protein 16 isoform X2

  2. XM_009435194.4 → XP_009433469.1  gamma-interferon-inducible protein 16 isoform X1

    See identical proteins and their annotated locations for XP_009433469.1

    UniProtKB/TrEMBL
    K7AH15, K7BFM3
    Conserved Domains (2) summary
    cd08305
    Location:14 → 87
    Pyrin; Pyrin: a protein-protein interaction domain
    pfam02760
    Location:205 → 373
    HIN; HIN-200/IF120x domain

  3. XM_054687361.1 → XP_054543336.1  gamma-interferon-inducible protein 16 isoform X1

    UniProtKB/TrEMBL
    K7AH15

  4. XM_009435199.4 → XP_009433474.1  gamma-interferon-inducible protein 16 isoform X1

    See identical proteins and their annotated locations for XP_009433474.1

    UniProtKB/TrEMBL
    K7AH15, K7BFM3
    Related
    ENSPTRP00000087201.1
    Conserved Domains (2) summary
    cd08305
    Location:14 → 87
    Pyrin; Pyrin: a protein-protein interaction domain
    pfam02760
    Location:205 → 373
    HIN; HIN-200/IF120x domain

  5. XM_063796280.1 → XP_063652350.1  gamma-interferon-inducible protein 16 isoform X2

  6. XM_016929973.4 → XP_016785462.1  gamma-interferon-inducible protein 16 isoform X1

    UniProtKB/TrEMBL
    K7AH15, K7BFM3
    Related
    ENSPTRP00000065596.1
    Conserved Domains (2) summary
    cd08305
    Location:14 → 87
    Pyrin; Pyrin: a protein-protein interaction domain
    pfam02760
    Location:205 → 373
    HIN; HIN-200/IF120x domain

  7. XM_063796283.1 → XP_063652353.1  gamma-interferon-inducible protein 16 isoform X3

  8. XM_063796281.1 → XP_063652351.1  gamma-interferon-inducible protein 16 isoform X3

  9. XM_063796286.1 → XP_063652356.1  gamma-interferon-inducible protein 16 isoform X4

RNA

  1. XR_010152170.1 RNA Sequence

  2. XR_010152178.1 RNA Sequence

  3. XR_010152172.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.