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ORC1 origin recognition complex subunit 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 456857, updated on 3-Apr-2024

Summary

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Official Symbol
ORC1provided by VGNC
Official Full Name
origin recognition complex subunit 1provided by VGNC
Primary source
VGNC:VGNC:6141
Locus tag
CK820_G0010624
See related
Ensembl:ENSPTRG00000000738
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
ORC1L
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (178600291..178635871)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (52663432..52698971, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene terminal uridylyl transferase 4 Neighboring gene small nucleolar RNA U13 Neighboring gene pre-mRNA processing factor 38A Neighboring gene coiled-coil and C2 domain containing 1B Neighboring gene zinc finger FYVE-type containing 9 Neighboring gene anaphase-promoting complex subunit 10-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA replication origin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic DNA replication checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear origin of replication recognition complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
origin recognition complex subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    178600291..178635871
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009457815.4 → XP_009456090.1  origin recognition complex subunit 1

    See identical proteins and their annotated locations for XP_009456090.1

    UniProtKB/TrEMBL
    A0A2J8NIC4, A0A2J8NID0, A0A6D2XYV7, H2PZ12, K7DL03
    Related
    ENSPTRP00000001270.3
    Conserved Domains (3) summary
    cd04719
    Location:44 → 170
    BAH_Orc1p_animal; BAH, or Bromo Adjacent Homology domain, as present in animal homologs of Saccharomyces cerevisiae Orc1p. Orc1 is part of the Yeast Sir1-origin recognition complex. The Orc1p BAH doman functions in epigenetic silencing. In vertebrates, a similar ORC ...
    pfam09079
    Location:776 → 849
    Cdc6_C; CDC6, C terminal winged helix domain
    cl26671
    Location:493 → 741
    CDC6; Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]

  2. XM_009457816.4 → XP_009456091.1  origin recognition complex subunit 1

    See identical proteins and their annotated locations for XP_009456091.1

    UniProtKB/TrEMBL
    A0A2J8NIC4, A0A2J8NID0, A0A6D2XYV7, H2PZ12, K7DL03
    Conserved Domains (3) summary
    cd04719
    Location:44 → 170
    BAH_Orc1p_animal; BAH, or Bromo Adjacent Homology domain, as present in animal homologs of Saccharomyces cerevisiae Orc1p. Orc1 is part of the Yeast Sir1-origin recognition complex. The Orc1p BAH doman functions in epigenetic silencing. In vertebrates, a similar ORC ...
    pfam09079
    Location:776 → 849
    Cdc6_C; CDC6, C terminal winged helix domain
    cl26671
    Location:493 → 741
    CDC6; Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]

  3. XM_054667074.1 → XP_054523049.1  origin recognition complex subunit 1

    UniProtKB/TrEMBL
    A0A2J8NIC4, A0A6D2XYV7, H2PZ12, K7DL03

  4. XM_054667075.2 → XP_054523050.1  origin recognition complex subunit 1

    UniProtKB/TrEMBL
    A0A2J8NIC4, A0A6D2XYV7, H2PZ12, K7DL03

  5. XM_054667078.2 → XP_054523053.1  origin recognition complex subunit 1

    UniProtKB/TrEMBL
    A0A2J8NIC4, A0A6D2XYV7, H2PZ12, K7DL03
Nucleotide Protein
Heading Accession and Version

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