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EPHB2 EPH receptor B2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 456613, updated on 29-Mar-2024

Summary

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Official Symbol
EPHB2provided by VGNC
Official Full Name
EPH receptor B2provided by VGNC
Primary source
VGNC:VGNC:10612
Locus tag
CK820_G0041642
See related
Ensembl:ENSPTRG00000000320
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (208099691..208309742, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (22989553..23199605)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene testis expressed 46 Neighboring gene lactamase beta like 1 Neighboring gene uncharacterized LOC107975238 Neighboring gene uncharacterized LOC129143487 Neighboring gene complement C1q B chain Neighboring gene complement C1q C chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane-ephrin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin type-B receptor 2
Names
ephrin receptor EphB2
XP_016811553.2
XP_016811556.2
XP_016811567.2
XP_063660468.1
XP_063660474.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    208099691..208309742 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063804398.1 → XP_063660468.1  ephrin type-B receptor 2 isoform X1

  2. XM_063804404.1 → XP_063660474.1  ephrin type-B receptor 2 isoform X2

  3. XM_016956078.4 → XP_016811567.2  ephrin type-B receptor 2 isoform X5

  4. XM_016956067.4 → XP_016811556.2  ephrin type-B receptor 2 isoform X4

  5. XM_016956064.4 → XP_016811553.2  ephrin type-B receptor 2 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials
Miscellaneous